Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01608 ATGGCACCACCAAGTTTTGATTTTTCATGTCTTCTGTGCACTGAAGACAGTAGCATTCTTGATGAAATTGATTTGGGTGGTTCAATGGAAGATGAAAATGACATGAATCAAACTGAGCAATTTGATGAGCCAATTGAGTATGTGCCACCACCATTGCAGCCACCTCCATTGCTGAGTGAGGAGAATTTGAAGGTTTTGATTGAAAAAGAATGTCATCACTTGCCTGCTAGTGATTATGTCAATAGGCTGAAAAATGGAGAATTGGATTTGCAGGGCAGGATGGAATCCATTGATTGGATGGAAAAGGCTGGACTGTACTTTGGTTTTGGACCTCTCTGTGTTTATCTAGCTGTACGCTACATGGATCGTTTCCTTTCTGTAGTTGACATGCAGAAGGAAAGAAAGTGGTCAATTCAACTCTTGGCTTTTTGTTGCTTATATCTGGCAGCCAAAATTGATGAGGTTGTTGTTCCTCGATCTGTTGATATGCAGATGGATGAAAAGAAGTATTTATTTGATAAGGAAACATTACGTACGACGGAGCTTATGATACTAAGCACATTGAAATGGAGAATGCAAGCAATTACACCTTTCTCCTACATTGACTTTTTCCTTAACAAGGTCAATGGTGATCATGTTCCAATAGGAGATTCAATTTTGCAATCTTTCCAACTCATAATGAGTACTGTAAGAGGACTTGACTTCATTCAGTTCAGACCATCAGAAATTGCAGCAGCTGTTGCAGTGCTAGTATCTGTGGAGGGTGAAAGCCTAACTGTTCACACTGAGAAAGCACTTTCTCTTCTCATTGAATATGTAGAAAAGGAGAAAGTAATGAAGTGTATTGAAATGATTCAACAGCTGTCATCAGGTAGTGGTTCTTCTGCAAAGGATGCGAATGTTTCTGTCCCTTTTGTGCCTCAAACTCCAATGGGAGTGTTGGATGCTCTATGCGTCAGCTACAATAGTGATGACAATCACTCAGATGTTACTACTGCACCTCTTGCAGATTCTCCACTTCATAACAGCCCTGATGCTAAACGCAAGAAGACCATAACCAGCTTTGAAGAGTGA 1074 0.4032 MAPPSFDFSCLLCTEDSSILDEIDLGGSMEDENDMNQTEQFDEPIEYVPPPLQPPPLLSEENLKVLIEKECHHLPASDYVNRLKNGELDLQGRMESIDWMEKAGLYFGFGPLCVYLAVRYMDRFLSVVDMQKERKWSIQLLAFCCLYLAAKIDEVVVPRSVDMQMDEKKYLFDKETLRTTELMILSTLKWRMQAITPFSYIDFFLNKVNGDHVPIGDSILQSFQLIMSTVRGLDFIQFRPSEIAAAVAVLVSVEGESLTVHTEKALSLLIEYVEKEKVMKCIEMIQQLSSGSGSSAKDANVSVPFVPQTPMGVLDALCVSYNSDDNHSDVTTAPLADSPLHNSPDAKRKKTITSFEE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01608 357 ProSitePatterns Cyclins signature. 93 124 IPR006671 -
Mepo7g01608 357 SMART Cyclin_C_2 195 309 IPR004367 -
Mepo7g01608 357 FunFam D6-type cyclin 76 193 - -
Mepo7g01608 357 CDD CYCLIN_AtCycD-like_rpt2 195 285 - -
Mepo7g01608 357 SMART cyclin_7 98 186 IPR013763 -
Mepo7g01608 357 Pfam Cyclin, N-terminal domain 63 192 IPR006671 -
Mepo7g01608 357 Gene3D - 76 193 - -
Mepo7g01608 357 Gene3D - 63 284 - -
Mepo7g01608 357 MobiDBLite consensus disorder prediction 342 357 - -
Mepo7g01608 357 PANTHER CYCLINS 60 287 IPR039361 -
Mepo7g01608 357 SUPERFAMILY Cyclin-like 53 192 IPR036915 -
Mepo7g01608 357 CDD CYCLIN_AtCycD-like_rpt1 93 190 - -
Mepo7g01608 357 MobiDBLite consensus disorder prediction 329 357 - -
Mepo7g01608 357 Pfam Cyclin, C-terminal domain 195 297 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01608 Mepo-Chr7 25316061 25319411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01608 60 332 Core Cell Cycle Gene Families AT2G22490 41.007 4.44e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01608 K18810 - mtr:11442318 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01608 7 25316061 25319411 Mepo7g01608 7 25316061 25319411 ECH