Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01601 ATGGAATTTGACGAACAAGAGGAGCAAGAAGAGGAGATGGAGATTCCAGAAACACAAACACCGAGTTATGACTCACTTGGTAACTCAGCTTCACGTCCAAAACTCACCGTCGGAGTTGACGGAAGAAAAGGTAACGGCAACGGCGGTTTTGCTTCGGTAAGGTACCGAGAATGTCAGAAGAATCACGCCGTTAGCTTCGGTGGCCACGCTGTTGACGGTTGTTGCGAGTTTATCGCTGCCGGTGAAGAAGGAACACTTGAAGCTGTTATTTGCGCCGCTTGTAACTGTCACCGGAACTTCCACCGCAAAGAGATCGATGGTGAAACGGTTAGTTCATGTAACCGGCCACAGCCACCACCTCCACCGCCGCAATACCATCACCACAGCAATCAATTCTCGCCTTACTACCACCGTGCTCCTCCTTCCACAGCCGGTTACCTTCACCACCATCATCTTGCAACTCCGGTGGCACATCACAGGCCGTTGGCTCTTCCCGCTGCTGCTTCCGGTGGTGGAATGAGCAGAGAAGATGATGATATGTCAAACCCTAGCAGTAGCGGTGGAGGTGGTGGTGGTGGTGGTAGCGGTGGTGGTGGATCAAAGAAGAGATTCAGAACAAAATTCACTCAGGAACAAAAAGAGAAGTTGCTGGCGTTTGCTGAAGAACATGGTTGGAGAATTCAGAAACAAGATGAAGCTGCTATAGAACAGTTTTGTGCTGAGAATTGTATCAAGAGAAATGTTCTTAAAGTTTGGATGCACAATAACAAGAACACTCTTGGTAAGAAACCCTAA 795 0.4868 MEFDEQEEQEEEMEIPETQTPSYDSLGNSASRPKLTVGVDGRKGNGNGGFASVRYRECQKNHAVSFGGHAVDGCCEFIAAGEEGTLEAVICAACNCHRNFHRKEIDGETVSSCNRPQPPPPPPQYHHHSNQFSPYYHRAPPSTAGYLHHHHLATPVAHHRPLALPAAASGGGMSREDDDMSNPSSSGGGGGGGGSGGGGSKKRFRTKFTQEQKEKLLAFAEEHGWRIQKQDEAAIEQFCAENCIKRNVLKVWMHNNKNTLGKKP 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01601 264 Pfam ZF-HD protein dimerisation region 53 105 IPR006456 -
Mepo7g01601 264 MobiDBLite consensus disorder prediction 165 203 - -
Mepo7g01601 264 MobiDBLite consensus disorder prediction 109 140 - -
Mepo7g01601 264 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 55 104 IPR006456 -
Mepo7g01601 264 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 33 260 - -
Mepo7g01601 264 MobiDBLite consensus disorder prediction 1 17 - -
Mepo7g01601 264 SUPERFAMILY Homeodomain-like 187 262 IPR009057 -
Mepo7g01601 264 FunFam Zinc-finger homeodomain protein 2 194 262 - -
Mepo7g01601 264 MobiDBLite consensus disorder prediction 18 32 - -
Mepo7g01601 264 MobiDBLite consensus disorder prediction 1 43 - -
Mepo7g01601 264 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 54 105 IPR006456 -
Mepo7g01601 264 NCBIfam homeobox domain, ZF-HD class 201 258 IPR006455 -
Mepo7g01601 264 Gene3D - 186 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01601 Mepo-Chr7 25175750 25177061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01601 7 260 ZF-HD Transcription Factor Family AT4G24660 48.235 3.48e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mepo7g01601 ZF-HD_dimer 6.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01601 - - gmx:100776421 326.635