Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01582 ATGCGCATTCACACCATATTCCCTGCACCCTCATCTCTCACTCTCTTTCTACTCTGTAAATTTTATCACCGCCATGCATGCAAACCGTTTCTTTTTCTTCTTTTTCTTTCTTTCATCTTTCCTGCAACGGCTCAGCCACGAAGCCCTTCACCACCGCCACAACTAGCGCAAGATGCATTCGCGAAAATGAAGTTCGACAAAACCATGGCATCAGTCCTTGTGATACTCGTCATGATTTTCTTCGTATTAGGCTTTGTTTCAATCTACACTCGCCAATGTAGAGAACGAAGAATACGAGGAAGGGTCGATCTCACTGTTCCGGTTACCGGTGGTGATGTTTGCCAGCAACCACGCGGTCTTGATCCAACGATCATCGAAAATTTTCCAAAGTTTGTATATTCGGAGGTGAAGGATCTCAAGATTGGAAGAGTCACGTTAGAATGTGCAGTGTGTTTAAATGAGTTTGCGGATGATGAAACGCTGCGTTTGATTCCTAATTGTAGCCATGTGTTTCATCGTGATTGTGTTGATGTTTGGTTGTTGCATCACTCAACTTGTCCGGTTTGTCGAGCTGATCTTGCTCCCGGTTCGGATGATGCCGGTTCTTCTATTCAGATACAAATCTCTGAACCAAATTTGGCTGAACCGGTTTTTAATCATGAACCGGATGTCATTGAACCGGCCAGTTTGGATGAGAAGAAAAAAGTTGCAACAGTGAGTCCAAGTGTGAATTTTGATGGTATGAACCGGACTCCGGTTCGGTCCATGTCAGTGGGTTTTGGGTTTATGAGATTGTTTTCTCGGTCTAACTCAACGGGTCAATTAATGGTTCGGTCGAATGAGGATTGTGAGCGGTTCACATTGAGATTGCCGGATGAAGTGCATAATCGATTAATGAATGATATCACGTTGCGCCGAACAAAGACTTGGGATGCTACATCGCGGAGTGGGAGAAGAGGTTACCGAACAAGGAGTGTGGGGAGGAACTTTCTACAATATGAGCGGTTCAATGTGGAGAGCCGGCTGGACCAAAAAGGGTTCACGTGTGCCCCGTCTTTTTTGGGCCGGGTTGGTTCGATGAGATCAACAAAGGATGGGAACAATGCAAGTGCAACAATGGGTGTTATGGATAAAGTTGATGTTGGAGAACGTTCTTCGGATCGTTTAGTTTAA 1173 0.4501 MRIHTIFPAPSSLTLFLLCKFYHRHACKPFLFLLFLSFIFPATAQPRSPSPPPQLAQDAFAKMKFDKTMASVLVILVMIFFVLGFVSIYTRQCRERRIRGRVDLTVPVTGGDVCQQPRGLDPTIIENFPKFVYSEVKDLKIGRVTLECAVCLNEFADDETLRLIPNCSHVFHRDCVDVWLLHHSTCPVCRADLAPGSDDAGSSIQIQISEPNLAEPVFNHEPDVIEPASLDEKKKVATVSPSVNFDGMNRTPVRSMSVGFGFMRLFSRSNSTGQLMVRSNEDCERFTLRLPDEVHNRLMNDITLRRTKTWDATSRSGRRGYRTRSVGRNFLQYERFNVESRLDQKGFTCAPSFLGRVGSMRSTKDGNNASATMGVMDKVDVGERSSDRLV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01582 390 PANTHER RING FINGER DOMAIN-CONTAINING 49 193 - -
Mepo7g01582 390 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 196 IPR013083 -
Mepo7g01582 390 CDD RING-H2_EL5-like 147 190 - -
Mepo7g01582 390 Pfam Ring finger domain 147 190 IPR001841 -
Mepo7g01582 390 SMART ring_2 148 189 IPR001841 -
Mepo7g01582 390 SUPERFAMILY RING/U-box 126 195 - -
Mepo7g01582 390 FunFam E3 ubiquitin-protein ligase ATL6 111 196 - -
Mepo7g01582 390 ProSiteProfiles Zinc finger RING-type profile. 148 190 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01582 Mepo-Chr7 24925750 24927903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01582 29 384 Rapid Response to Elicitors AT3G05200 38.378 8.50e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01582 K10664 - gmx:100807828 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01582 7 24925750 24927903 Mepo7g01582 7 24925750 24927903 ECH
Mepo7g01582 7 24925750 24927903 Mepo3g07019 3 83805231 83806896 PCT