Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01581 ATGGTAATCGGTCAAGCAATAGGACCGGAAGATCCAACGGAGAACAACAAATCAGTAGCCACCATAATGGGAATTGTAGTCCTTATGTTCCTCTTCTCCGGTTTCCTTTCTCTCTACTCGACTAAATGCACCGATCATCAACAAGGAGTTATTTTTGACCTGACTTTACCTAACAGAGCAAATGGTCTCCGGTCACAAAACAACGAGCCAAGTAACGGTCTTAACCAAGATGTCATAGACACATTCCCAACTTTTCGTTACTCCAATGTCAAGGGACTCAAGATCGGGAAAAACACGTTGGCTTGTGCTGTTTGTTTGAATGAGTTTCAAGATGATGAAACATTGCGTTTAATCCCTAAATGTAACCATGTGTACCACCATGGTTGCATCGATATTTGGCTTGTCTCTCATGATACTTGTCCAGTTTGTCGTGCTAACCTTGCTCCAAGACCCGATATTGACACCACCGAGCCTCAAATGATATCGAATCAGATACCAGAAGGAGAAGATCATCGCCATGAATTGAGTATAAGAATTTCAAATGAGGAAGAGGTAGAACATATTGTCGAAGAGGAACAAAAGAAAGCCAACGTGGAAGTGGAAAATTCACCAAAGTTAGATGTACTTCGTAGGTCTAAAACATATTCTGCACCAATACGGTCAAGATCAACGGGATTCTTATCTATTCTCTTGTTATCACGGTCAAATTCGACAGGTGTGTTGGTGCAACCAGGTGAGGATTGTGAGAGGTTTACACTGAGGTTACCTGATAAAGTTCGAAAGCAGATGATGATGAACACGATAACGCTTAAGCGTGCAAAAAGTTGTGTAAGTTTTACGAGAATGAGTAGTGGCACATGCGGATATAGGTCAAGAAGTTTTGGTTGTGGAAGTGGGATGGGTCAAGTGCAGTACGAAAGGTTTGGAAGTGAGGAAGAAGAGAATTATTTAGGGTTTCTTAGGAATAGTTGGAATAATAAATCAGTGAGAAAATCTCCTATGAAGTGTTTGGGAGTTGATATCGACAATGATGATGACGAACGATCCTCTGATCTTTTGTTTCCTGTGTAG 1071 0.4118 MVIGQAIGPEDPTENNKSVATIMGIVVLMFLFSGFLSLYSTKCTDHQQGVIFDLTLPNRANGLRSQNNEPSNGLNQDVIDTFPTFRYSNVKGLKIGKNTLACAVCLNEFQDDETLRLIPKCNHVYHHGCIDIWLVSHDTCPVCRANLAPRPDIDTTEPQMISNQIPEGEDHRHELSIRISNEEEVEHIVEEEQKKANVEVENSPKLDVLRRSKTYSAPIRSRSTGFLSILLLSRSNSTGVLVQPGEDCERFTLRLPDKVRKQMMMNTITLKRAKSCVSFTRMSSGTCGYRSRSFGCGSGMGQVQYERFGSEEEENYLGFLRNSWNNKSVRKSPMKCLGVDIDNDDDERSSDLLFPV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01581 356 CDD RING-H2_EL5-like 102 144 - -
Mepo7g01581 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 150 IPR013083 -
Mepo7g01581 356 FunFam E3 ubiquitin-protein ligase ATL6 63 150 - -
Mepo7g01581 356 SUPERFAMILY RING/U-box 96 150 - -
Mepo7g01581 356 SMART ring_2 102 143 IPR001841 -
Mepo7g01581 356 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 11 243 - -
Mepo7g01581 356 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
Mepo7g01581 356 Pfam Ring finger domain 101 144 IPR001841 -
Mepo7g01581 356 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01581 Mepo-Chr7 24916801 24918217 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01581 16 293 Rapid Response to Elicitors AT3G05200 39.789 8.53e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01581 K10664 - gmx:100814384 330.872