Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01579 ATGGCTAGGATCCAAAGAAAGCTCTTCCCAACAGAACCTACCACAAACCAAACCTTAGATTGTTACGGCTTTTGTGACCCTTCATGTCCTTCAAATTGCTACACTAATACAAATTACTATTTCTCACCCCCACCACTAGAACACACAACACAAGTTAACCACGTTTCCTCTTATTTCATAATCCTCATTTCACTATTCTCATTAATTTTTATCATCATTGGTTTCTATGTGATCAAAGTAAAATGCTATAATGAGATGTGTGGTTGGAGAATCAATAACTCGGTTCGCTCTCAAACCGAGAATTCTGAAGAGTTTCTCAATGAAAACCAGGTTGATCGCGATCATAATCGCGATCACCCAGTATGGCTCATTGCAACGGTTGGTTTACAACAATCAATTATAAATTCGATTACGGTTTGCAAGTATAGAAAAAATGAAGGGTTAATTGAAGGAACAGAATGTTCAGTTTGTTTGAATGAGTTTCATGAAGATGAAACATTAAGACTATTGCCAAAATGTAGCCATGCTTTTCACATTTCTTGTATTGATACTTGGTTGAGATCTCATACTAATTGCCCTCTTTGTCGAGCTGGTATTGTCTCCAACAATGTTACTCCTGAAGTAACAATACCGAATTCGGAACAAGAAAATAACATTTTGGGAAGAAATCAAGAGACTCATTTGGAGAATCCTAGGAATGATCAAGAAGATGTCTTAAGCAACAATATTGTTATCAATGTGGCATTTGAAACTAGGGTTGAAACAACCGCGGAATCAAGCGATGAATCAAATTACAAGGAGCAAATAATCGATGATCCAACGGTTACGAATAATGAGATACAAATTGAGATGGGTTCGGTTTCAACTGAACCTGGAAGCTATCATCAAATTAGTCCTTGGAAGCTTATTACTCAAAAAAATAGTAAACCAACACGTCGTTCTCCAATTGAAGAGCGTTTACACGTAAGGCCAATAGCTATGAAAAAGTTTTTCCCTTTACACCAAAGAAAGGGTTTTAAAAAAAGATACGTGACTGCAGTTTGGAGCATAACATCATAG 1059 0.3664 MARIQRKLFPTEPTTNQTLDCYGFCDPSCPSNCYTNTNYYFSPPPLEHTTQVNHVSSYFIILISLFSLIFIIIGFYVIKVKCYNEMCGWRINNSVRSQTENSEEFLNENQVDRDHNRDHPVWLIATVGLQQSIINSITVCKYRKNEGLIEGTECSVCLNEFHEDETLRLLPKCSHAFHISCIDTWLRSHTNCPLCRAGIVSNNVTPEVTIPNSEQENNILGRNQETHLENPRNDQEDVLSNNIVINVAFETRVETTAESSDESNYKEQIIDDPTVTNNEIQIEMGSVSTEPGSYHQISPWKLITQKNSKPTRRSPIEERLHVRPIAMKKFFPLHQRKGFKKRYVTAVWSITS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01579 352 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 204 IPR013083 -
Mepo7g01579 352 SUPERFAMILY RING/U-box 144 202 - -
Mepo7g01579 352 Pfam Ring finger domain 153 196 IPR001841 -
Mepo7g01579 352 CDD RING-H2_EL5-like 153 196 - -
Mepo7g01579 352 SMART ring_2 154 195 IPR001841 -
Mepo7g01579 352 FunFam RING-H2 finger protein ATL54 129 202 - -
Mepo7g01579 352 ProSiteProfiles Zinc finger RING-type profile. 154 196 IPR001841 -
Mepo7g01579 352 SMART FANCL_C_2 150 203 - -
Mepo7g01579 352 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 50 202 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01579 Mepo-Chr7 24825162 24826476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01579 1 269 C3H Transcription Factor Family AT1G72220 42.088 5.15e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01579 - - mtr:11433251 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01579 7 24825162 24826476 Mepo7g01579 7 24825162 24826476 ECH