Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01562 ATGGATCGCTATGAGGTTGTCAAAGATATTGGTTCTGGGAATTTTGCTGTTGCAAAGCTAGTTAGGGACATCTTTACCAAAGAGCTTTTTGCTGTTAAGTTTATTGAGAGAGGCCAAAAGATTGATGAGCATGTCCAGAGGGAAATCATGAACCATAGATCATTGAAGCATCCTAATATTGTTAGGTTCAAAGAGGTCCTTCTAACACCAACACATCTAGCCATTGTAATGGAGTATGCTGCTGGAGGAGAACTCTTTGAGAGGATATGTAGTGCTGGTAGATTTAGTGAAGATGAGGCAAGGTTTTTCTTTCAGCAATTGATATCAGGAGTCAGTTACTGTCATTCAATGCTAATATGCCATAGAGATCTGAAGCTTGAAAACACACTCTTAGACGGAAGCACCGCACCACGAGTCAAAATTTGCGACTTTGGTTACTCAAAGTCATCTGTGTTGCACTCACAACCAAAGTCTACGGTAGGAACTCCAGCTTACATTGCACCTGAGGTTCTGACGAAGAAAGAATACGATGGAAAGATTGCAGATGTTTGGTCTTGTGGAGTCACCTTATACGTGATGTTAGTCGGCGCTTATCCTTTTGAAGACCCCGCGGATCCAAAAGACTTTAAGAAAACCATTGCTAAGATACTTAGTGTCCAGTACAAAGTTCCTGATTTCGTACGAGTTTCACCGGAATGTATAAATCTTCTATCTCAAATATTTGTGGCTAATCCTGAAAAGAGAATAACAATACCAGAAATAAAAAACCATCCATGGTTTTTGAGGAACTTACCAGTAGAATTAATGGAAGGTGGAAGCTGGCAAAGCAATGATGTAAATAATCCATCACAAAGTGTTGATGAAGTTCTGTCCATTCTACAAGAGGCAAGAAAACCTCTTCACAACCCTAAGATTGGTGGACTTCTTAGTGTAGGCAGCATGGACTTGGATGAGTTTGATCTTGATGCAGATCTTGAAGATATAGAAACATTTGGTGATTTTATGTGTCCTCCTCTTTAA 1020 0.398 MDRYEVVKDIGSGNFAVAKLVRDIFTKELFAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMLICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPADPKDFKKTIAKILSVQYKVPDFVRVSPECINLLSQIFVANPEKRITIPEIKNHPWFLRNLPVELMEGGSWQSNDVNNPSQSVDEVLSILQEARKPLHNPKIGGLLSVGSMDLDEFDLDADLEDIETFGDFMCPPL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01562 339 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Mepo7g01562 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Mepo7g01562 339 SUPERFAMILY Protein kinase-like (PK-like) 1 271 IPR011009 -
Mepo7g01562 339 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo7g01562 339 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mepo7g01562 339 PANTHER SERINE/THREONINE KINASE 3 270 - -
Mepo7g01562 339 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Mepo7g01562 339 CDD STKc_SnRK2 3 259 - -
Mepo7g01562 339 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo7g01562 339 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo7g01562 339 FunFam Serine/threonine-protein kinase SAPK2 1 79 - -
Mepo7g01562 339 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01562 Mepo-Chr7 24684815 24688798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01562 1 264 Miscellaneous Gene Families AT2G34180 44.649 2.34e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mepo7g01562 Pkinase 9.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01562 K14498 - gmx:100798091 609.372