Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01546 ATGAATCAAAACGATCTACAACCTCTACCTTTGCTAAGTAGCTTCCTAGGTTCAACTCCTCAAGAACCTTTACCACAAAATGAAAGTCATAAGTCATGTTTTAATCAAGCTGAGGATGTCACAGTGGCCTTACAAATAGGCCTTCCTAACAATTCAAGTGAATCACCAAATGAAAATGGATTTGTGAATGTCCCAAATCATGTTCCTAACAATTACTGGATACCAACTCAAGAACAGATTCTCATTGGATTCAGTCATTTCTCTTGCCCAGTTTGCCTCAAAACTTTCAATCGTTACAACAACCTTCAGATGCATATGTGGGGGCATGGTTCACAGTATCGAAGAGGACCAGACTCACTGAAAAGAACCCATCCACGACCATTGTTAGACCTACCATGCTATTGTTGTTCAAATGGATGCAAGAACAACATTGAGCATCCAAGAGCTAAGCCATTGAAGGATTTCAGGACACTGCAGACACACTACAAGAGGAAGCATGGTTCGAAGACGTTTACTTGTCGAAAATGTGGGAAGCCATTGGCAGTGAAAGGTGATTGGAGAACTCATGAGAAAAACTGTGGCAAGCGTTGGCTTTGTATTTGTGGATCAGATTTCAAACACAAGAGGTCACTTAAGGATCATATCAAAGCATTTGGATTTGGTCATAGCCCTTTTTCTTCTTCCTCTGGTGGGATTTAA 699 0.4077 MNQNDLQPLPLLSSFLGSTPQEPLPQNESHKSCFNQAEDVTVALQIGLPNNSSESPNENGFVNVPNHVPNNYWIPTQEQILIGFSHFSCPVCLKTFNRYNNLQMHMWGHGSQYRRGPDSLKRTHPRPLLDLPCYCCSNGCKNNIEHPRAKPLKDFRTLQTHYKRKHGSKTFTCRKCGKPLAVKGDWRTHEKNCGKRWLCICGSDFKHKRSLKDHIKAFGFGHSPFSSSSGGI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01546 232 Gene3D Classic Zinc Finger 86 109 - -
Mepo7g01546 232 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Mepo7g01546 232 SMART c2h2final6 87 109 IPR013087 -
Mepo7g01546 232 SMART c2h2final6 171 191 IPR013087 -
Mepo7g01546 232 SMART c2h2final6 134 166 IPR013087 -
Mepo7g01546 232 PANTHER ZINC FINGER PROTEIN WIP2 25 225 IPR043584 GO:0003700|GO:0010468
Mepo7g01546 232 FunFam Zinc finger protein WIP2 140 222 - -
Mepo7g01546 232 Pfam Zinc finger, C2H2 type 87 106 IPR013087 -
Mepo7g01546 232 SUPERFAMILY beta-beta-alpha zinc fingers 82 109 IPR036236 -
Mepo7g01546 232 FunFam zinc finger protein WIP2-like 86 109 - -
Mepo7g01546 232 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01546 Mepo-Chr7 24506714 24508207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01546 1 227 C2H2 Transcription Factor Family AT1G34790 56.627 6.61e-97 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo7g01546 zf-C2H2 0.0034 CL0361