Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01542 ATGGCTTATCCACATTATCGATCACAATTTGGAGACACAACATTCACTAAGGTTTTTGTTGGAGGACTAGCTTGGGAAACTCCAACTGATGAAATGAGGACATATTTTGAACAATTTGGTGACATACTTGAAGCTGTCATTATCACTGATAAGAATACAGGAAAATCTAAAGGATACGGATTTGTAACATTTCGTGATCCAGAATCAGCTAGAAGGGCTTGTGCTGATCCAAACCCAGTAATTGATGGAAGAAGAGCTAATTGTAACATTGCTTCTCTTGGACGTCCTAGACCATCACCACCAAGAGGGAGGGGTACATATCAAGGTGGGGGTGTGGGGACAGGAGCACCAGGAGGAGCAGCGGCGTACGGCGGTGTTCCGGCAGGAGGGCCACCACAAATGGCAGCAGGAGCAACAGCAGCTCCAGTAATGTACCAACCATATGGCTACCCCACCTACACTCCTGAATACGGGTACCCTCAAGCCACAATGTATAACCCTCAGATTCAGCAAGCACAATACTATCAACAACTTTATGGACCATCATCTTCAACTATGGGTTCACCATATTATTATGGCTATTCTATGCAAGCAGCAGCACCAAGGGGTACATTTTCAACACCCCAACCACATCGCATACCAGCTGGACCATCCTATCTATACTACCCTACTACACCAATGGAAGGAGCTTCTTTCTCTGCTGCATATCGTCCACTTCAACAACCATTAATAAGGCAACCTTCTCCTACCCCTTCTCCTAGTGATTCACAGACTCAGCAACGTACCTCATCAGAGACAGCATCTGGAGTAGTTATAACTTCGGAAAGTTCAAATACCCAAGGGAAGAACAACAACTAA 858 0.4522 MAYPHYRSQFGDTTFTKVFVGGLAWETPTDEMRTYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRPSPPRGRGTYQGGGVGTGAPGGAAAYGGVPAGGPPQMAAGATAAPVMYQPYGYPTYTPEYGYPQATMYNPQIQQAQYYQQLYGPSSSTMGSPYYYGYSMQAAAPRGTFSTPQPHRIPAGPSYLYYPTTPMEGASFSAAYRPLQQPLIRQPSPTPSPSDSQTQQRTSSETASGVVITSESSNTQGKNNN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01542 285 Gene3D - 3 113 IPR012677 -
Mepo7g01542 285 SUPERFAMILY RNA-binding domain, RBD 9 119 IPR035979 GO:0003676
Mepo7g01542 285 MobiDBLite consensus disorder prediction 250 285 - -
Mepo7g01542 285 SMART rrm1_1 17 89 IPR000504 GO:0003723
Mepo7g01542 285 PANTHER BOULE-RELATED 6 260 - -
Mepo7g01542 285 FunFam RNA-binding protein 24-B isoform X1 3 112 - -
Mepo7g01542 285 MobiDBLite consensus disorder prediction 237 285 - -
Mepo7g01542 285 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 75 IPR000504 GO:0003723
Mepo7g01542 285 CDD RRM_RBM24_RBM38_like 16 91 - -
Mepo7g01542 285 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
Mepo7g01542 285 MobiDBLite consensus disorder prediction 91 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01542 Mepo-Chr7 24449660 24456491 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01542 12 92 C2H2 Transcription Factor Family AT2G19380 39.506 4.02e-15 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01542 7 24449660 24456491 Mepo7g01542 7 24449660 24456491 ECH