Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01484 ATGGGTCGTGTTAAACTTGAAATAAAAAGAATAGAGAACACAACGAATCGGCAAGTTACGTTCTCAAAGCGTAGAAATGGTCTCATCAAGAAAGCTTATGAGTTATCAATCCTTTGTGATATTGATATTGCTCTTATAATGTTTTCTCCATCAAATCGTCTTAGTCATTTTTCCGGTAAAAGAAGGATAGAAGATGTTTTAAGTCGTTACATTAATCTGCCTGACCAAGAAAGAGATAATGCTGTAAGTTTTCCTGAGCCACCCTACCGCCGTTTATTTTGTATTTTACAGTATTTTCTCGGGATTCTTCAGCAGTTGAGAAGTGAAAATGACGTATCCCTTCATATGTCCAATCCGGGAGACATTAACTCTGAGATTGAGGAACTCCAACACGAAGTTTGTAGATTACAACAACAACTTCAAATGGCAGAGGAACAGATAAGGATATACGAACCCGACCCATTAAAGATGACATCTATTGCAGAGCTTGAAACCAGTGAAAAAAACATAGTAGAAACCTTGTCACGTGTCATGCAGAGAAAGGAAGTTTTGTTGAACAACCAACTATCTTCGTATGATCCATCTAGTATTCAGGGAATGCCCACCACTTTCGAGAATGTAGGTTGGCTACAGGATAGTGGTCAGAACCATTCGCATAATATTTTTGATGCATCCACTCCTATGGATCCTCTCAGGGATTTGTCCTCTGCTGTGTATGGTTCATTTTTACAAGGAACAAGTTCAAATGTTGTTGATCAAAGAGGTATAGGAGCCTGCCACGTGGCAAATTCAAACGATGGTAACATGCATGCATGGCCACAAGGATACACATTATATCCTCATCAACAACATCATCATATTCAACATGACATAGTAGGAACTGATCATCATCACCACCACCACATTCAAGATATGATGCCACATGGACAAATGAACATGCCAATCACTGCCTCACAAGTTGAACCACCCAAAAATGAATCAACAACAGAATATGATCAATGTAAACAACCTAATCATCAGCTTCATGCTCAATGA 1035 0.3884 MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSNRLSHFSGKRRIEDVLSRYINLPDQERDNAVSFPEPPYRRLFCILQYFLGILQQLRSENDVSLHMSNPGDINSEIEELQHEVCRLQQQLQMAEEQIRIYEPDPLKMTSIAELETSEKNIVETLSRVMQRKEVLLNNQLSSYDPSSIQGMPTTFENVGWLQDSGQNHSHNIFDASTPMDPLRDLSSAVYGSFLQGTSSNVVDQRGIGACHVANSNDGNMHAWPQGYTLYPHQQHHHIQHDIVGTDHHHHHHIQDMMPHGQMNMPITASQVEPPKNESTTEYDQCKQPNHQLHAQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01484 344 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Mepo7g01484 344 CDD MADS_MEF2_like 2 75 IPR033896 GO:0000977|GO:0045944
Mepo7g01484 344 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mepo7g01484 344 MobiDBLite consensus disorder prediction 316 344 - -
Mepo7g01484 344 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 221 - -
Mepo7g01484 344 Gene3D - 13 85 IPR036879 GO:0003677|GO:0046983
Mepo7g01484 344 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Mepo7g01484 344 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Mepo7g01484 344 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mepo7g01484 344 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Mepo7g01484 344 Coils Coil 126 146 - -
Mepo7g01484 344 FunFam MADS-box transcription factor 41 13 92 - -
Mepo7g01484 344 SUPERFAMILY SRF-like 2 79 IPR036879 GO:0003677|GO:0046983
Mepo7g01484 344 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01484 Mepo-Chr7 23467598 23473436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01484 1 317 Type I MADS-box Gene Family AT1G22130 55.692 2.08e-111 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Mepo7g01484 SRF-TF 2.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01484 - - gmx:100305913 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01484 7 23467598 23473436 Mepo7g01484 7 23467598 23473436 ECH