Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01474 ATGTCTCCCCCACCGGCCACCATTACTCCCCCTCCGGCACGCCGCGTGAAATCCAAAATCTGGCAGACATGTGCCGGTCCATCGGTGAACGTTCCAAAGGTACGTTCTAAAGTTTATTACTTCCCACAAGGTCACTTGGAACATGCCTGCCCTTCACCTAACGCTCAAACAATCACCGTTATTGATGGTTACCGTCCTTCCTTTCCGTGTGTCATCACGGCTGTTGATCTCCTAGCTGATCCTCATACCGATGAGGTCTTCGCCAAATTGCTACTCAGTCCGGTAACTGAAACTGAAGGACAAGAAAGTTCTGAGGTTTTTGACGAAGAAGATGACGGTGATAAGTTTGTTTCCTTTGTAAAGACTCTTACAAAATCTGATTCTAATAATGGCGGTGGATTCTCTGTACCTCGCATTTGTGCTGACTTGATCTTCCCCAAGCTTGACCTAAATTCTCCTTTTCCGTCTCAGCAACTGTCTGTTGCTGATGTTCATGACGGAGTTTGGAAGTTTGCTCATGTCTATCGAGGGAGACCCAAAAGACACCTTTTTACTACTGGTTGGACTCCGTTTGTGAACACGAAAAAACTCGTTGCTGGTGATTCTATTGTTTTCATGAAAAACACTGCCGGAGATATAGTTGTTGGAATCCGCAGAAACATGAAGTTTGCTGCAGCTGAAGTAAAGGCGGTGAATAATAAGAAAGAGGAAGAGGGTAAAGAGAATGGTTTGGAGGTTAAGGGAGAGGGTTTTTCTCGAGGCGGGAGAAGCGGAATGCTAACCGAGAAGGCGGTTATTGAGGCAGTGGAATCGGCGGAAAAGAATATGGCATTTGAAGTTATATATTACCCTAGGGCTAATTGGTGCAATTTTGTAGTTGATGCAAATGTTGTGGATGATGCTATGAAGATTGGTTGGGCATCTGGAATGAGAGTGAAGCTTCCTTTGAAGATGGATGAATCTTCAAATTCAAAGATGACATTTTTTCAGCCTCAAGGAACAATCTCTAGTGTGTCCAATGTCCCTAATTGGCGCATGCTTCAGGTTAACTGGGATGAACTTGAAATCTCGCAAAATCAAAACCGCGTTAATCCTTGGCAAGTTGAACTTATTTTCCACACACCTGCAGTGCATTTACCATTCCTCTCAACAAAAAAGCCTAGACTAGTTCAAGATTCTGCCTTGTTGTGTGATAACAAGGGTGATCCCTTCATTCCTATGATAGAGTTCCCTATGGGATCTTTGAACAAAACATTGTTGAAATCCGGTTATTTTCTAGAAGGCATGCAGGGAGCCAGGCAAGATCTTTTATCTCTAACAGGTTTTTCAAACCCCTTGAATGATAAGAGTTATAGTTTCTTTGTGAACAACCAAAACATTGACAGGCGGACATCTAACAACTTGTCACAAAATAACCTTAGTAGTTTGAACACCTTTGGGATAGATTTTGTTGAGACTCACAACAGTAACACAAAAGGAGTTGGGTCTAATTCAATCAAGTTATTTGGTAAGATCATACAACCTGTTGAAAGTGATGTCCATGATTCTGGTACAAAGGGAGAGGATTGCTCTAAGGGATCCAATGAAATTTGA 1593 0.4256 MSPPPATITPPPARRVKSKIWQTCAGPSVNVPKVRSKVYYFPQGHLEHACPSPNAQTITVIDGYRPSFPCVITAVDLLADPHTDEVFAKLLLSPVTETEGQESSEVFDEEDDGDKFVSFVKTLTKSDSNNGGGFSVPRICADLIFPKLDLNSPFPSQQLSVADVHDGVWKFAHVYRGRPKRHLFTTGWTPFVNTKKLVAGDSIVFMKNTAGDIVVGIRRNMKFAAAEVKAVNNKKEEEGKENGLEVKGEGFSRGGRSGMLTEKAVIEAVESAEKNMAFEVIYYPRANWCNFVVDANVVDDAMKIGWASGMRVKLPLKMDESSNSKMTFFQPQGTISSVSNVPNWRMLQVNWDELEISQNQNRVNPWQVELIFHTPAVHLPFLSTKKPRLVQDSALLCDNKGDPFIPMIEFPMGSLNKTLLKSGYFLEGMQGARQDLLSLTGFSNPLNDKSYSFFVNNQNIDRRTSNNLSQNNLSSLNTFGIDFVETHNSNTKGVGSNSIKLFGKIIQPVESDVHDSGTKGEDCSKGSNEI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01474 530 Gene3D - 306 374 - -
Mepo7g01474 530 FunFam Auxin response factor 117 221 - -
Mepo7g01474 530 Pfam B3 DNA binding domain 119 220 IPR003340 GO:0003677
Mepo7g01474 530 SMART B3_2 119 221 IPR003340 GO:0003677
Mepo7g01474 530 SUPERFAMILY DNA-binding pseudobarrel domain 113 222 IPR015300 -
Mepo7g01474 530 Gene3D - 117 221 IPR015300 -
Mepo7g01474 530 CDD B3_DNA 118 219 IPR003340 GO:0003677
Mepo7g01474 530 ProSiteProfiles B3 DNA-binding domain profile. 119 221 IPR003340 GO:0003677
Mepo7g01474 530 Pfam Auxin response factor 268 353 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo7g01474 530 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 508 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01474 Mepo-Chr7 23321702 23324973 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01474 1 529 B3 DNA Binding Superfamily AT1G77850 39.336 1.42e-120 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo7g01474 B3 2.7e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01474 - - tpra:123904492 575.474