Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo7g01471 | ATGAACTCTTCATCATCATCAACTCAATTAATCGCGGCGAAAAGGATGAACATATATGAGCCATTTCTTCAAGTGAGTATGTGGGAGGATAGTTTTAAAGTTGATCATAGTACTTTGAATTCAATTGCTTCCCCAATGTTGAAGATGAACATAAGTAGCATGGAAAACAAGTCTGAATGTATCCCTCAAGAATCAAGAGAACCTTCTGGAGATGATCAAGAGACTATTGAAGAACCTGTTCCTAAGGTACTACGACGTCAAGCACAGAATCGCGAGGCTGCTCGAAAATGTCGGCTGCGAAAAAAGGCTTATGTTCAACAACTGGAAACAAGTAGATTGAAGCTCATGCAGTTGGAATTGGATATCGAGAAAACAAGAAAACAGGGTTTATACAGAAGCAGTTTATTGGATGCCGGTTATATGGGATCGTCTGGAACAATAAACTCAGGGATATCATTGTTTGAAATTGAATATGGACGTTGGATTGAAGAGCAAGATCGACAAAACGAAGAACTGAGAAATGCATTGCAAACGACTGCATCTGATATACAACTTCATCTACTTGTTGAGAGTAGCTTGAACCAATACTCAAATCTTTTCAGAATGAAAGCAGAAGCTGCAAAGGCTGATGTTTTCTATTTAATCTCTGGCGTATGGAAATCACCGGTCGAACGCCTTTTTCTTTGGATTGGAGGATCTCGTCCATCACAAATTCTAAATATCGTGGTACCGAAACTTGAGAATTTGAATGATCAACAAATTGCTAGCATTAACAACCTGCGTTTATCATCTCAGCAAGCTGAAGATGCACTATCAATAGGGTTAGAGAAACTCCAGCAGAGTATGATCAACAACATTCAAGCCGATCCCTTGGATTTCGGTAACTACGGCTTTCAAATGGCTGCTGCCATGGATAAAGGAGAAGCAGTAGAAGGTTTTGTAATTCAGGCAGATCACCTTAGGCAACAAACTCTGTTATACATGTCACGCATCTTATCAATTGGTCAAGCTGCTCAAGGCTTGCTGGCTATGGGGGAATACTTTCATCGTCTTCGCACTCTTAGTTCGTTGTGGACTTCTCGTTCATGTCATCATTTTTACCCTACTCAACACTCAAATTAA | 1122 | 0.4002 | MNSSSSSTQLIAAKRMNIYEPFLQVSMWEDSFKVDHSTLNSIASPMLKMNISSMENKSECIPQESREPSGDDQETIEEPVPKVLRRQAQNREAARKCRLRKKAYVQQLETSRLKLMQLELDIEKTRKQGLYRSSLLDAGYMGSSGTINSGISLFEIEYGRWIEEQDRQNEELRNALQTTASDIQLHLLVESSLNQYSNLFRMKAEAAKADVFYLISGVWKSPVERLFLWIGGSRPSQILNIVVPKLENLNDQQIASINNLRLSSQQAEDALSIGLEKLQQSMINNIQADPLDFGNYGFQMAAAMDKGEAVEGFVIQADHLRQQTLLYMSRILSIGQAAQGLLAMGEYFHRLRTLSSLWTSRSCHHFYPTQHSN | 373 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo7g01471 | 373 | Coils | Coil | 162 | 182 | - | - | |
Mepo7g01471 | 373 | Gene3D | - | 82 | 133 | - | - | |
Mepo7g01471 | 373 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 5 | 362 | - | - | |
Mepo7g01471 | 373 | Coils | Coil | 108 | 128 | - | - | |
Mepo7g01471 | 373 | MobiDBLite | consensus disorder prediction | 55 | 77 | - | - | |
Mepo7g01471 | 373 | Pfam | Seed dormancy control | 170 | 243 | IPR025422 | GO:0006351|GO:0043565 | |
Mepo7g01471 | 373 | SUPERFAMILY | Leucine zipper domain | 84 | 113 | IPR046347 | GO:0003700|GO:0006355 | |
Mepo7g01471 | 373 | ProSiteProfiles | DOG1 domain profile. | 151 | 361 | IPR025422 | GO:0006351|GO:0043565 | |
Mepo7g01471 | 373 | MobiDBLite | consensus disorder prediction | 60 | 77 | - | - | |
Mepo7g01471 | 373 | FunFam | BZIP family transcription factor | 81 | 130 | - | - | |
Mepo7g01471 | 373 | SMART | brlzneu | 78 | 142 | IPR004827 | GO:0003700|GO:0006355 | |
Mepo7g01471 | 373 | Pfam | bZIP transcription factor | 82 | 111 | IPR004827 | GO:0003700|GO:0006355 | |
Mepo7g01471 | 373 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 85 | 100 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo7g01471 | Mepo-Chr7 | 23204968 | 23207650 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo7g01471 | 1 | 361 | Calmodulin-binding Proteins | AT1G77920 | 53.050 | 3.26e-125 | 363 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Mepo7g01471 | DOG1 | 4.3e-26 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo7g01471 | K14431 | - | gmx:100775882 | 542.347 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo7g01471 | 7 | 23204968 | 23207650 | Mepo3g05678 | 3 | 70786035 | 70788995 | PCT |