Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01467 ATGTCTCTGCCGCCTCAGCCACGCGGTGTCCGACGCAAAATTTGGCAGACATGTGCCGGCCCCGGCGTGAAGATTCCAAAGCTGAACTCAATCGTTTACTATTTTCCAAAAGGTCACTTGGAACATGCATGTTCTTCCCCTGACGCTGCGACAGCCTCCTTTCTTTATGATCTTTATTCTTCATCCTATCTCTGCATCATCTCAGCGGTTGATCTTCTTGCGGATCCTCACACCGATGAAGTTTTCGCCAAACTCATCCTCACTCCCGTAGCAATTGACGGTGGTGTCCAAGTCCAAGAACCAGCTCCTCCCATGGTTCCCGACGAAGAAGACAAAGATGGAAACATTGTTTCCTACGTCAAGACTCTCTCACAGTCTGATTCTAATAATACATTCTCTGTACCTCGTGATTGCGCGCGATTGATCTTTCCAAATTTTAACAATCCAATGCCATCTCAGGAGCTTTCTCTCACCGATGTTCAAGGCCGAGTCTGGAAGTACAACTATACCTTTCGCAAGAATCCTGATAGATACCGTTTCTCTACTGGCTGGACTAGCTTTAGGGACGACAAGAAACTCGTCGCCGATGATTCCGTTGTTTTCATGAAAAACTCTGCGGGAGAGTTATCTGTTGGAATACGCCGGCACATGAAGAAGGAGGGTGAAGAGGGAGGCTGGAAGAGGGAGAAGTTAACCGAGTCGGTGGTTTTCGAAGCTGTGAAATTTGCGGAAGAGAACACAGCGTTTGAAGTTGTGTATTATCCAAGTCATAATTGGTCTGATTTTGTGGTGGATGCTAAGACAGTGGATGACGCTATGAGGATTGTTTGGAATTCTGGAATGAGAGTGAAGCTTCTTTTGAAGACTGATGAATCTTCAAATTCAAATATGAAAAATGTTCAGTCCCTGGGAACAATCTCCAATGTGTCTAATCCTTCTTCTAAATCCCCTAATTGGCGCATTCTTCAGGTTAACTGGGATGGACCTAATATCCCGCAGAATCCAAACCTAGTCAATCCTTGGCAGGTTGAAGTTTCCAACATACCTGCACCTTCGACTTCGTCCTCCACTGTCAACCTCACCTCAACAAAAGCTCCTAAACTTGCTGAGAGTTCATCCCCCCAACAAATTCAACATTCAATGGCAAGGTCGAGTGGTACTTTTCCTGACACATAG 1176 0.4575 MSLPPQPRGVRRKIWQTCAGPGVKIPKLNSIVYYFPKGHLEHACSSPDAATASFLYDLYSSSYLCIISAVDLLADPHTDEVFAKLILTPVAIDGGVQVQEPAPPMVPDEEDKDGNIVSYVKTLSQSDSNNTFSVPRDCARLIFPNFNNPMPSQELSLTDVQGRVWKYNYTFRKNPDRYRFSTGWTSFRDDKKLVADDSVVFMKNSAGELSVGIRRHMKKEGEEGGWKREKLTESVVFEAVKFAEENTAFEVVYYPSHNWSDFVVDAKTVDDAMRIVWNSGMRVKLLLKTDESSNSNMKNVQSLGTISNVSNPSSKSPNWRILQVNWDGPNIPQNPNLVNPWQVEVSNIPAPSTSSSTVNLTSTKAPKLAESSSPQQIQHSMARSSGTFPDT 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01467 391 SUPERFAMILY DNA-binding pseudobarrel domain 115 216 IPR015300 -
Mepo7g01467 391 SMART B3_2 119 217 IPR003340 GO:0003677
Mepo7g01467 391 Gene3D - 116 217 IPR015300 -
Mepo7g01467 391 ProSiteProfiles B3 DNA-binding domain profile. 117 217 IPR003340 GO:0003677
Mepo7g01467 391 MobiDBLite consensus disorder prediction 349 391 - -
Mepo7g01467 391 Pfam Auxin response factor 239 323 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo7g01467 391 Pfam B3 DNA binding domain 120 216 IPR003340 GO:0003677
Mepo7g01467 391 Gene3D - 277 350 - -
Mepo7g01467 391 CDD B3_DNA 118 215 IPR003340 GO:0003677
Mepo7g01467 391 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 10 374 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01467 Mepo-Chr7 23149875 23151506 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01467 8 346 B3 DNA Binding Superfamily AT1G77850 38.095 2.99e-74 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo7g01467 B3 2.5e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01467 - - mtr:11435441 421.779