Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01465 ATGTCTCTTCGTCTTCCATCTCGTGTGGACCCCAAATTATGGCAGAAATGTGCCGGTCCCGACGTCAAGATTCCAAAGATTCACTCTAAAGTTTACTACTTCCCACAAGGTCATTTGGAACATGCATGTTCTTCCCCTACTGCTGCCACAATCAACTTTCTTGGTGGTTACCGTCCATCCTTTCCATGCATCGTTTTAGCAGTTGATTTCTTGGTTGAACCTCTCACCGACGAGGTCTTTGCCAAACTAGTCCTCAATCCCGTATCAACTGATGGTGGTGCTCAAGAACCTGGCCCCCTTGTAGTTCCCGGCCAAGAAGATGGAAACAATCTTGCTTCCTATGTCAAGACTCTCACAATAACTGATACTCAATCTGGATTCAATATACCTCGTGAATGCGCCGACTTGTTCTTTCCAAAGCTTGAGTTGGACAACTCTAAAGAAGTCTCTGTCACTGATCTTCCAGGCAATGTGTACACTTATACCCACACGAAACAGAGCAGACTAACTAAAGGCTGGAATAACTTTGTCAGTGAGAAGAAACTCCTCCCCGGCGATTCTGTTGTTTTCATCAAAAACTCTTCCGGAAAGATACATATCGGAATTCGCAGGAACCCTAACTTCCCTGCAGCTGAAGGTGGTGAAAGAGGCCGGAAATTAACTGAGAGTGCGGTCTTGGATGCAGCGGATTTGGCTAACAAGAACGTGGCGTTTGAAGTTGTTTTTTATCCAACAGCTGGGAATTGGTGTAATTTTGTGGTGGATGCCAAGGTTGTAGATGATGCCATGAAGTTTGGTTGGAAATCTGGAATGAGGGCAAAGCTTCATTTGAAGGAACCTGAATCTTCAAATTTAACAATAAGAGGTTTTCAGCGGGAGGGGACAATCTCTAATGATTCTTCTAATGTTCCTAATTGGCGCATGCTTGAGGTTAAATGGTATGAACCTAATACCCCGCAGAAACCACCCCTGATCAATCCTTGGGAGGTTGAAGTTTACCCGTCAACTTCCTCCTCCACTGCCAACATCTCCACAACAAAAAGTCCTAAACTTTCTCAGAGTTCTTCTCCCCGACAAATTCAAAATTCTTTAATGCCAACTACACTGACATCATTACCGCCTCCACCGTATATTTTTCCATCTGGCATGCAGGGAGTCGGGAAAGAAGGTGCTGACTTGTTCGCAGGGTCAAGTGGTACTTTGCTTGATACAGGGCTAAAGTTTGGCAGTTCTAAAGATGCTGACTTGTTCGCAGAGTCGAGTGGTACTTTGCCTGATACAAGGCTAAAGCTTGGCAGTTCTAAAGGCGCTGACTTGGGTGCAGAGTCGACTGATACTTTGGCTGATACAGAGCTAAAGCTTGGCAGTTCTAAAGGCGCTGACTTGGGTGCAGAGTCGACTGATACTTTGGCTGATACAGAGCTAAAGCTTGGCAGTTCTAAAGGTGCGGACTTGGGCGCAGAGTCCAGTGATACTTTGGCTGATACAGAGCTAAAGCTTGGCAGTTCTAAAGGTGCGGACTTGGGTGCAGAGTCCAGTGATACTTTGGCTGATACAGAGCTAAAGCTTGGCAGTTCTAAAGGTGCTGAGTTGTTGCCTCATAGGTCCAATGAGGCAAGCACCAAGTGA 1629 0.4586 MSLRLPSRVDPKLWQKCAGPDVKIPKIHSKVYYFPQGHLEHACSSPTAATINFLGGYRPSFPCIVLAVDFLVEPLTDEVFAKLVLNPVSTDGGAQEPGPLVVPGQEDGNNLASYVKTLTITDTQSGFNIPRECADLFFPKLELDNSKEVSVTDLPGNVYTYTHTKQSRLTKGWNNFVSEKKLLPGDSVVFIKNSSGKIHIGIRRNPNFPAAEGGERGRKLTESAVLDAADLANKNVAFEVVFYPTAGNWCNFVVDAKVVDDAMKFGWKSGMRAKLHLKEPESSNLTIRGFQREGTISNDSSNVPNWRMLEVKWYEPNTPQKPPLINPWEVEVYPSTSSSTANISTTKSPKLSQSSSPRQIQNSLMPTTLTSLPPPPYIFPSGMQGVGKEGADLFAGSSGTLLDTGLKFGSSKDADLFAESSGTLPDTRLKLGSSKGADLGAESTDTLADTELKLGSSKGADLGAESTDTLADTELKLGSSKGADLGAESSDTLADTELKLGSSKGADLGAESSDTLADTELKLGSSKGAELLPHRSNEASTK 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01465 542 CDD B3_DNA 113 204 IPR003340 GO:0003677
Mepo7g01465 542 ProSiteProfiles B3 DNA-binding domain profile. 112 206 IPR003340 GO:0003677
Mepo7g01465 542 Gene3D - 267 340 - -
Mepo7g01465 542 Gene3D - 111 205 IPR015300 -
Mepo7g01465 542 SMART B3_2 114 206 IPR003340 GO:0003677
Mepo7g01465 542 MobiDBLite consensus disorder prediction 519 542 - -
Mepo7g01465 542 Pfam Auxin response factor 228 309 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo7g01465 542 SUPERFAMILY DNA-binding pseudobarrel domain 111 204 IPR015300 -
Mepo7g01465 542 Pfam B3 DNA binding domain 116 205 IPR003340 GO:0003677
Mepo7g01465 542 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 363 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mepo7g01465 542 MobiDBLite consensus disorder prediction 418 443 - -
Mepo7g01465 542 MobiDBLite consensus disorder prediction 338 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01465 Mepo-Chr7 23122490 23124627 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01465 9 332 B3 DNA Binding Superfamily AT1G77850 36.000 7.68e-64 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo7g01465 B3 1.2e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01465 - - mtr:11435441 425.631