Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01458 ATGTCTCTGCCTGAGCCACGCCGTGTGAAATCCAAAATATGGCAAATATGCGCGGGACCTGCTGTCAAGATTCCGAATATTGGCTCAAAAGTCTACTACTTCCCACAAGGTCACTTGGAACATGCTTGTTCATCCCCTAACATTGAAACACAGCTCCGTCTATGTCTTCGCCTTCCATCCGTTCTCTGTATCATCTCATCTGTTGATCTTCTGGCGGATCCTCACACCGATGAAGTTTTCGCCAAACTGCTCCTCACTCCGGTAACAACTGATGGTGGTGTCCAAATCCAAGAACCAGCTCCTCCTGACTTTCCCGACCAAGAAGAGAACAATGGCAACAATCTTGCTATCCAAGTCCAAGAACCAGCTCCTCCTCCTGAGGTTCCCGACCAAGAAGATGATAATCTTGTTTCCTTTGTCAAGATTCTCACAGAATCAGATGCTAAATGTGTACTGTTTGTACCTCATCAATGCGTTCGCTTGATCTTGCCCAAACTTGACTGGGAGGATGGAATGCAGCCACAGAATATCTCGGTCACCGACATTCAAGGTAATATATGGAAGTACAAATGTGTCTACCGAAAGAAGGACTCCAATGCACATCGATTCACTTTTACTACTGGCTGGTCTCGATTTGTGACAGAGAAGAAACTCGTCGCTGGCGATTCTGTTGTTTTCATCAAAAACTCTGCCGGAAAGATATCTGTCGGAATTCGCAGGAATTCTAAGTTCCCTGCAGCTGAAGATGAAGGCGGGAAAAGGGAGTATTTAACGGAAAAGGCAGTTATGGATGCAGTGGAGTTGGCGGAGAAGAGCGTGGCATTTGAAGTTGTGTATTATCCTACGGCTAATTGGTGTGATTTTGTGGTGGATGCGAGCATTGTTGACGAGGCTATGAAGAATGGATGGGAATCTGGAATGGGAGTCAAGCTTTGTTTGAACGAAGATGGATATTCAATTTCAAAGAAGCCATATTTTCAACCTCGGGGGACAATTTCTGATATGTCTGATGCTCCTTCTGATGTCCCTAGTTGGCGAATGCTTCAGGTTAATTGGGATCCTGATATCTCGCAGAATCCAAACAGTGTTAATCCTTGGCAGGTTGATATTTACCCTATACTTGCTCAGATTTCTTCCCACCTACAAATGCCATTCTCTTATCCTCCAACTCCATCACCTCTATTACCTTCTATGTCAACTTCTTCCTTCATTCCTATGACAGAGCTCCCTTATTCAACAATGGGATCATTGAACCAAACATTGTTGAATTCTGATACTTTTCCAGATGGCATGCTGGGAGCTAGCCAGGACCATTTATCTGTATCAGATTCGTCTAAAGTTTTGAATGATAAGGGTGATGGTTTCAATGGGAACAGTTCAGTGGCAGGGTCGAGTGGCACTTTGCCTGAATCATTGGAAAGTCCTAAATCAGCTGAGTTGTTTCCGCTTAACCATGATAGTTGGAAGTCCTATGGGGCCAATGAGCCATGCACCAAGTGA 1500 0.4467 MSLPEPRRVKSKIWQICAGPAVKIPNIGSKVYYFPQGHLEHACSSPNIETQLRLCLRLPSVLCIISSVDLLADPHTDEVFAKLLLTPVTTDGGVQIQEPAPPDFPDQEENNGNNLAIQVQEPAPPPEVPDQEDDNLVSFVKILTESDAKCVLFVPHQCVRLILPKLDWEDGMQPQNISVTDIQGNIWKYKCVYRKKDSNAHRFTFTTGWSRFVTEKKLVAGDSVVFIKNSAGKISVGIRRNSKFPAAEDEGGKREYLTEKAVMDAVELAEKSVAFEVVYYPTANWCDFVVDASIVDEAMKNGWESGMGVKLCLNEDGYSISKKPYFQPRGTISDMSDAPSDVPSWRMLQVNWDPDISQNPNSVNPWQVDIYPILAQISSHLQMPFSYPPTPSPLLPSMSTSSFIPMTELPYSTMGSLNQTLLNSDTFPDGMLGASQDHLSVSDSSKVLNDKGDGFNGNSSVAGSSGTLPESLESPKSAELFPLNHDSWKSYGANEPCTK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01458 499 SUPERFAMILY DNA-binding pseudobarrel domain 134 242 IPR015300 -
Mepo7g01458 499 SMART B3_2 139 242 IPR003340 GO:0003677
Mepo7g01458 499 Gene3D - 136 241 IPR015300 -
Mepo7g01458 499 ProSiteProfiles B3 DNA-binding domain profile. 137 242 IPR003340 GO:0003677
Mepo7g01458 499 MobiDBLite consensus disorder prediction 444 472 - -
Mepo7g01458 499 Pfam Auxin response factor 265 349 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo7g01458 499 CDD B3_DNA 138 240 IPR003340 GO:0003677
Mepo7g01458 499 Gene3D - 302 376 - -
Mepo7g01458 499 Pfam B3 DNA binding domain 139 241 IPR003340 GO:0003677
Mepo7g01458 499 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 399 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mepo7g01458 499 MobiDBLite consensus disorder prediction 444 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01458 Mepo-Chr7 23060429 23062818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01458 7 436 B3 DNA Binding Superfamily AT1G77850 35.158 2.92e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo7g01458 B3 1.4e-14 CL0405