Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01419 ATGCCAATGAACCATGGCCAAAGCCAACAATCCACAAGGTGGTACAAGCTATGCTTTATACCTACAATAGGTGACAGTTCAGATGATTCTGACACAGAATCTGTAATCATAGCTCCAAGTACTCCAACTCCACATCCAGCACCGTCACCGCCGAGTCCGGAACTTGAAATCAACTGGCTTTGTCCACCACCACCACCTCCTCCACTTCCTTTTTTTACACCATCACGACTATCAGTACGATCAGTACCACCGCTACAATTTCATACTGCAAACTCAGAACCTCAAATCAATCAGCGGTCTTCACAACCGTCGCTACTGCCATCACAACCATCAAATCCAGAACCTCAAATCAACTGGAGTTTTCCTCCACCTCCACCGCCACCACCGCCTTTTTTTCCACCATCACCAACATTATTACCACTAGAATTCCCGGCTTCAAATCCAGAACCTCGAGTTAACCTGCAGTATTCACAACCACTACCACCACCGCCATTACCACCACAAGATCCATGGAATCACTTCATTAATACTTTCCCTTCTTTGACCACGCAAGGTCAGTCTGATGACGATCAAAGTGAGTTCCTTCGAATTCCAGATAACGTTATCGATGCTATACATATGGTGAGAATATCAAAGTTGCATTTAAAAGATGATCTCTCTCACTGTCCTATTTGCATGGAGGAGTTTAAACTTGGTGACCAAGCATGCCAGTTACCCTGCAACCATATATTCAAGTTCGAATGCATTCTTCGTTGGCTTAACACGAGCAAAACCTGTCCAGTTTGCAGGCTTCAGTTAGATGGTTTTGTAGGACAAGGTAGTTCTTATGACATAGGTGACGATGAAGAGAGTTTGGACCTTGAACCACAAATTCCACTACAAGTAACTAATAGTTTGCAAAACCTTTTTCAATCTTCTGTGGATTCTCAAGTTACAGAAGATGATGCAGGTGAAAACTCTGATGAAGCTGAGTATGACAGTGCCTGTGATGAGTTAGGTTGGTATTAA 1008 0.4345 MPMNHGQSQQSTRWYKLCFIPTIGDSSDDSDTESVIIAPSTPTPHPAPSPPSPELEINWLCPPPPPPPLPFFTPSRLSVRSVPPLQFHTANSEPQINQRSSQPSLLPSQPSNPEPQINWSFPPPPPPPPPFFPPSPTLLPLEFPASNPEPRVNLQYSQPLPPPPLPPQDPWNHFINTFPSLTTQGQSDDDQSEFLRIPDNVIDAIHMVRISKLHLKDDLSHCPICMEEFKLGDQACQLPCNHIFKFECILRWLNTSKTCPVCRLQLDGFVGQGSSYDIGDDEESLDLEPQIPLQVTNSLQNLFQSSVDSQVTEDDAGENSDEAEYDSACDELGWY 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01419 335 Pfam Ring finger domain 221 263 IPR001841 -
Mepo7g01419 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 268 IPR013083 -
Mepo7g01419 335 MobiDBLite consensus disorder prediction 25 39 - -
Mepo7g01419 335 ProSiteProfiles Zinc finger RING-type profile. 222 263 IPR001841 -
Mepo7g01419 335 MobiDBLite consensus disorder prediction 91 115 - -
Mepo7g01419 335 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 118 266 - -
Mepo7g01419 335 MobiDBLite consensus disorder prediction 21 63 - -
Mepo7g01419 335 CDD RING-H2_PA-TM-RING 221 263 - -
Mepo7g01419 335 SUPERFAMILY RING/U-box 201 266 - -
Mepo7g01419 335 MobiDBLite consensus disorder prediction 91 163 - -
Mepo7g01419 335 MobiDBLite consensus disorder prediction 116 143 - -
Mepo7g01419 335 SMART ring_2 222 262 IPR001841 -
Mepo7g01419 335 MobiDBLite consensus disorder prediction 41 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01419 Mepo-Chr7 22446568 22447789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01419 202 282 C3H Transcription Factor Family AT1G68180 36.047 1.10e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01419 - K11982 cam:101501744 330.102