Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01404 ATGGGTCCACCAAGGCAGAAACATAATGGATCTCATGTCTCCCAAAGAACAAGAAGGTTGAGAATTATCTATGATGACCCAGATGCAACAGATTCATCATCAGATGAAGAAAATCACTATGTCGAGGAACCGGGGAAGAGGAAGAGATGTGTGTTTGAATTTGCCATCCCTAATTCTTCTCAAACCACTGTTTGTCCAGTTGAAACAGTGACTGATAAGAATAAGAGTCGTACAAAACCAAAACCTATAGTCAGACAACCTTCTTGCAAATATAAAGGCGTTCGAATGAGGAAATGGGGTAAATTTGCTGCTGAAATTCGTAACCCGTTCAAGGGTACACGCGAATGGTTGGGAACCTTTGACACGGCTGAAGCCGCTTCACATGCATATCAAACTAAAAGACTTGAATTTCAAGTCATTGCTAATCGGCGGTTGGCTTATGAGAAGAGCCGCAAGAGTTTCAAGAATGTTGTTTCTAAAAGGTCAAAGATTGGTATGTCACATAAATCTTCATCGCCCGGCTTGGTTAATTGTGTTCCTAAATTAGTTGAGAGGGCTAAGATTTCATGTAATGAACCTATTGTTGAGAGTCTTAGTATTTCTGTGGTGCAACAGAAACCGGATGTTGTTGAGGATATGTCTTGGCTTGAATCGGATTGGTTAGTATTTGATGGTTTAGGGCAGGGTTTGGATGATCTTGGTTGCCTTGATGACCTTCAACTTTTTGATTTTGATATGAATGATGCAATTGATTTTTCAGATTTTAACTTTTATGACTTTGAGTCAAATAATTTTCTTGATGATGTTGGTGCTGAATATGTTGATGTTGATGCTGAATCTGAATCTGTTGATGAAGATGAGATTGCTAGCTGGATTGAAGAACCCTATAATACACCATCTCCATAA 906 0.3907 MGPPRQKHNGSHVSQRTRRLRIIYDDPDATDSSSDEENHYVEEPGKRKRCVFEFAIPNSSQTTVCPVETVTDKNKSRTKPKPIVRQPSCKYKGVRMRKWGKFAAEIRNPFKGTREWLGTFDTAEAASHAYQTKRLEFQVIANRRLAYEKSRKSFKNVVSKRSKIGMSHKSSSPGLVNCVPKLVERAKISCNEPIVESLSISVVQQKPDVVEDMSWLESDWLVFDGLGQGLDDLGCLDDLQLFDFDMNDAIDFSDFNFYDFESNNFLDDVGAEYVDVDAESESVDEDEIASWIEEPYNTPSP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01404 301 SMART rav1_2 90 144 IPR001471 GO:0003700|GO:0006355
Mepo7g01404 301 CDD AP2 89 130 IPR001471 GO:0003700|GO:0006355
Mepo7g01404 301 SUPERFAMILY DNA-binding domain 90 137 IPR016177 GO:0003677
Mepo7g01404 301 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 16 140 - -
Mepo7g01404 301 PRINTS Ethylene responsive element binding protein signature 91 102 IPR001471 GO:0003700|GO:0006355
Mepo7g01404 301 PRINTS Ethylene responsive element binding protein signature 113 129 IPR001471 GO:0003700|GO:0006355
Mepo7g01404 301 MobiDBLite consensus disorder prediction 18 41 - -
Mepo7g01404 301 Gene3D AP2/ERF domain 89 147 IPR036955 GO:0003700|GO:0006355
Mepo7g01404 301 MobiDBLite consensus disorder prediction 1 41 - -
Mepo7g01404 301 Pfam AP2 domain 89 131 IPR001471 GO:0003700|GO:0006355
Mepo7g01404 301 ProSiteProfiles AP2/ERF domain profile. 90 148 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01404 Mepo-Chr7 22211288 22212193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01404 14 267 AP2-EREBP Transcription Factor Family AT1G68550 35.145 2.55e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo7g01404 AP2 1.3e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01404 - - mtr:25494767 484.182