Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01403 ATGGATGTCGGGTTGCTTGAGTTTGATTGGGAAATTCAACTAGCAGCATATAAAAATAACCAACTTCACTTCAATGACATCGTTCCAGACCATGCTGAAATCATAAAGATAGAAAATGAAGAAGTGAAGAAAGAAGATGAGGTTGAAAATGGAGTGTTGACAATCTCATCAATATTGCCTCCTGGTAAGAAGGAAGAGGTAAAAAAAGAAGAGGATGTGGAAAACAATGTTTTGCCAATGCTATTAACATTGCCTCCTATTAGCTTTAGGAAAAAAAGATCACCTTTGTTATTTGATGAAATAAAGAAACATTTTGATGTTCCTCAGACAACGGCTGCCAAAAATATGAATGTTGGGATGACCATTTTAAAAAAAAGGTGCAAGGAGCTCAATATAACAAAGTGGCCTTGCCGAAAATTTAAGACTCTACAATCACTCATAAGTGATTTTAAGGAATTGCGTTTGGAAAACGAGATTGCCTAA 483 0.354 MDVGLLEFDWEIQLAAYKNNQLHFNDIVPDHAEIIKIENEEVKKEDEVENGVLTISSILPPGKKEEVKKEEDVENNVLPMLLTLPPISFRKKRSPLLFDEIKKHFDVPQTTAAKNMNVGMTILKKRCKELNITKWPCRKFKTLQSLISDFKELRLENEIA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01403 160 PANTHER PROTEIN RKD4 93 149 IPR044607 GO:0003700
Mepo7g01403 160 Pfam RWP-RK domain 98 142 IPR003035 -
Mepo7g01403 160 ProSiteProfiles RWP-RK domain profile. 84 160 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01403 Mepo-Chr7 22196260 22198202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01403 100 159 AtRKD Transcription Factor Family AT5G53040 55.000 7.71e-17 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mepo7g01403 RWP-RK 1.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01403 - - aprc:113850801 111.309