Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01330 ATGTCCGATTCAACCGCTCCACTTCTTCAGAATGCACGTCAACGTGCGTTACTGGAGAAACAACCTCCAGCACGGGCCTGGACCCATCTTCGTAACATGATCATTGTACCTGAGATGATTGGGAGCATTATTGGAGTGTACAATGGGAAGACCTTTAACCAGCTTGAAATCAAACCTGAGATGATCGGTCATTACCTTGCTGAATTCTCGATTTCATACAAGCCTGTTAAGCATGGTAGACCTGGTATTGGTGCTACTCACTCCTCCAGGTTCATTCCTCTCAAGTGA 288 0.4618 MSDSTAPLLQNARQRALLEKQPPARAWTHLRNMIIVPEMIGSIIGVYNGKTFNQLEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01330 95 ProSitePatterns Ribosomal protein S19 signature. 48 72 IPR020934 GO:0003723
Mepo7g01330 95 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 11 95 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo7g01330 95 Gene3D 30s Ribosomal Protein S19; Chain A 1 95 IPR023575 GO:0003735|GO:0005840|GO:0006412
Mepo7g01330 95 SUPERFAMILY Ribosomal protein S19 19 79 IPR023575 GO:0003735|GO:0005840|GO:0006412
Mepo7g01330 95 PRINTS Ribosomal protein S19 family signature 28 47 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo7g01330 95 PRINTS Ribosomal protein S19 family signature 48 60 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo7g01330 95 PRINTS Ribosomal protein S19 family signature 60 75 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo7g01330 95 Pfam Ribosomal protein S19 8 78 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo7g01330 95 PIRSF RPS19p_RPS19a_RPS15e_RPS19o 4 95 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo7g01330 95 Hamap 30S ribosomal protein S19 [rpsS]. 1 84 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01330 Mepo-Chr7 21167258 21169159 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01330 9 95 Cytoplasmic Ribosomal Protein Gene Family AT1G04270 82.759 3.07e-47 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01330 K02958 - pvy:116114493 144.436