Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01290 ATGGATGGAGGTAGTTGCATAGACGAAAGCACTACAACCGAATCACTTTCAATAACAATATCACCAGCAAAGAAGCCGTCAACGCCGCCACCTCCCAACAGCCTATGCCGCGTCGGCAGCGGCGCAAGCGCTGTTGTGGACTCCGACGGCAGCGGCGTTGGCGAAGCTGAGTCAAGGAAGCTTCCATCTTCAAAGTACAAAGGTGTTGTACCACAACCAAATGGTCGTTGGGGAGCACAGATTTACGAAAAGCACCAGCGCGTGTGGCTTGGAACATTTAACAAAGAAGATGAAGCTGCAAAAGCTTATGATGTTGCCGCACAACGTTTCCGCGGCAAAGATGCTGTAACAAACTTTAAACCACTCTCTGACCACAACAACGACGACATGGAAGTCGAGTTTCTCAACTCGCATTCCAAGTCAGAGATTGTGGACATGTTAAGAAAACATACATACAATGACGAGCTGGAACAGAGCAAGCGCAATCGTGGCTTCGTCAGTAGACGAAGCCATGACTGTTCTGGCTCTGTTAACTTTGCCAGCTCGGCATATAACACCGATAAAAGGGCGCGTGAAGCTCTGTTTGAAAAGGTTGTTACCCCTAGCGACGTTGGGAAGTTAAATCGGTTAGTTATACCGAAGCAGCATGCTGAGAAGCACTTTCCATTACAAAAAGCCGACTGCGGCGCAGGAAGCACGTCCGCAGCTGGGAAGGGAGTGCTTTTGAATTTTGAAGACATTGGAGGGAAAGTGTGGAGATTTAGATACTCTTATTGGAACAGTAGCCAAAGCTACGTTCTAACAAAAGGTTGGAGCCGGTTCGTTAAGGAGAAGAATCTGAAAGCCGGTGATACGGTTTGTTTTCAACGGTCTACTGGACCGGAGAAGCAGCTGTTTATTGATTGGAAAGCAAGGAAGAATGTTAATGAGGTTGGGTTGTTTGTTCCGGTTGGACCGGTTGTTGAGCCGGTTCAGATGGTTCGGTTATTTGGGGTTAATATTTTGAAACAACTCCCTGGATCCGATGGTAATAATAGTGGCAATGTTATTGCTGGGTTCTGCAATGGAAAGAGGAAGGAGTTAGATATGTTTACTTTTGACTCTTGCAAGAAGCCTAAGATTATTGGAGCTTTGTAA 1137 0.4661 MDGGSCIDESTTTESLSITISPAKKPSTPPPPNSLCRVGSGASAVVDSDGSGVGEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNKEDEAAKAYDVAAQRFRGKDAVTNFKPLSDHNNDDMEVEFLNSHSKSEIVDMLRKHTYNDELEQSKRNRGFVSRRSHDCSGSVNFASSAYNTDKRAREALFEKVVTPSDVGKLNRLVIPKQHAEKHFPLQKADCGAGSTSAAGKGVLLNFEDIGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDTVCFQRSTGPEKQLFIDWKARKNVNEVGLFVPVGPVVEPVQMVRLFGVNILKQLPGSDGNNSGNVIAGFCNGKRKELDMFTFDSCKKPKIIGAL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01290 378 MobiDBLite consensus disorder prediction 1 69 - -
Mepo7g01290 378 SMART B3_2 195 306 IPR003340 GO:0003677
Mepo7g01290 378 SUPERFAMILY DNA-binding pseudobarrel domain 194 303 IPR015300 -
Mepo7g01290 378 ProSiteProfiles AP2/ERF domain profile. 65 120 IPR001471 GO:0003700|GO:0006355
Mepo7g01290 378 SMART rav1_2 65 126 IPR001471 GO:0003700|GO:0006355
Mepo7g01290 378 SUPERFAMILY DNA-binding domain 64 120 IPR016177 GO:0003677
Mepo7g01290 378 CDD B3_DNA 194 291 IPR003340 GO:0003677
Mepo7g01290 378 CDD AP2 64 119 IPR001471 GO:0003700|GO:0006355
Mepo7g01290 378 Pfam AP2 domain 64 112 IPR001471 GO:0003700|GO:0006355
Mepo7g01290 378 Gene3D AP2/ERF domain 64 121 IPR036955 GO:0003700|GO:0006355
Mepo7g01290 378 Gene3D - 183 312 IPR015300 -
Mepo7g01290 378 ProSiteProfiles B3 DNA-binding domain profile. 195 305 IPR003340 GO:0003677
Mepo7g01290 378 MobiDBLite consensus disorder prediction 1 23 - -
Mepo7g01290 378 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 60 342 IPR044800 GO:0003700
Mepo7g01290 378 FunFam AP2 domain-containing protein RAP2.8 64 121 - -
Mepo7g01290 378 Pfam B3 DNA binding domain 195 302 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01290 Mepo-Chr7 20621952 20623438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01290 5 378 B3 DNA Binding Superfamily AT1G25560 58.718 1.61e-141 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-RAV Mepo7g01290 B3 9.2e-29 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01290 K09287 - gmx:100776987 555.829