Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01266 ATGGAGAAAGATAACGACTATTCGGCACCACCCATGCCTTCAAGTTTCAACACACTTGACTACTCCCTTGATCATCATCAACACCAACAACAACAATACGAACAGCTTTTGAAGTATCGAGTTGGCGAAACATCGGGTGAAAACAACAACGGAATGGTGGATAATTACATGCCTCAAACACAAACTTCTGGAGGATTTTATGGTGCAAACTCTTTTGATAAAATGAGTTTTGCAGATGTGATGCAGTTTGCAGATTTTGGACCTAAATTAGCCTTAAACCGCGAAGAATCAGGTATCGAAGACCCGGTTTATTTTCTCAAGTTTCCTGTCTTAAACAATAAGATAGAAGACCAAAACTTGATGTTGAGTGGTGATGGGTTAGGAGAAAATGACGAGAGGTTCAAATTAACTAGCGTAGAGGATAAATCAAGAGATCAACAAGGTCACGAAGAAGCTCGAGTTTCTGACGAGAACAACTCGGTGCAAGAGAAGAATTGTGCAGTAGTGCAAGAGAACAACAAGAAGAGGAAGAGACCAAGAACTGTTAAGACAAGTGAAGAAGTTGAGAGTCAACGTATGACTCACATAGCTGTTGAAAGGAATCGAAGGAAACAAATGAATGAGCATCTTCGTGTCCTTAGATCCCTCATGCCTGGTTCATACGTGCAAAGGGGTGATCAAGCTTCTATAATTGGAGGGGCTATAGAGTTTGTGAGGGAATTGGAACAACTTCTTCAATGTCTAGAATCACAAAAGAGAAGGAGACTACTAGGAGAAGCACAATCAAAACAAGTTGGGGATTCATCTCTTGCATCAACACAACAACAGCCTCCATTTTTTCCAGCTCCTTTACCAAATGACCAGATGAAGCTAGTTGAGATGGAAACTGGACTTCAAGAAGAAACTGCAGAGAGTAAGTCATGTTTGGCTGATGTAGAAGTGAAACTTCTAGGATTTGATGCAATGATTAAAATTCTCTCAAGGAGAAGGCCTGGACAGTTGATCAAGACCATTGCTGCTCTTGAAGATATGCAGCTCATTATCCTTCACACCAACATCACCACTATTGAACAGACAGTTCTTTATTCATTCAATGTCAAGGTAGCTAGTGATACAAGGTTCACGGCTGAAGATATAGCAAGCTCGGTTCAGCAGATACTAAGTTTTATTCATGCAAACACTAGCATGTGA 1191 0.4064 MEKDNDYSAPPMPSSFNTLDYSLDHHQHQQQQYEQLLKYRVGETSGENNNGMVDNYMPQTQTSGGFYGANSFDKMSFADVMQFADFGPKLALNREESGIEDPVYFLKFPVLNNKIEDQNLMLSGDGLGENDERFKLTSVEDKSRDQQGHEEARVSDENNSVQEKNCAVVQENNKKRKRPRTVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEAQSKQVGDSSLASTQQQPPFFPAPLPNDQMKLVEMETGLQEETAESKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDMQLIILHTNITTIEQTVLYSFNVKVASDTRFTAEDIASSVQQILSFIHANTSM 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01266 396 CDD ACT_UUR-ACR-like 322 386 - -
Mepo7g01266 396 Gene3D - 181 256 IPR036638 GO:0046983
Mepo7g01266 396 MobiDBLite consensus disorder prediction 1 20 - -
Mepo7g01266 396 MobiDBLite consensus disorder prediction 169 192 - -
Mepo7g01266 396 SMART finulus 196 247 IPR011598 GO:0046983
Mepo7g01266 396 PANTHER TRANSCRIPTION FACTOR FAMA 104 387 IPR044283 GO:0003700|GO:0010052
Mepo7g01266 396 MobiDBLite consensus disorder prediction 138 192 - -
Mepo7g01266 396 CDD bHLH_AtFAMA_like 193 260 - -
Mepo7g01266 396 MobiDBLite consensus disorder prediction 259 279 - -
Mepo7g01266 396 Pfam Helix-loop-helix DNA-binding domain 191 242 IPR011598 GO:0046983
Mepo7g01266 396 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 190 256 IPR036638 GO:0046983
Mepo7g01266 396 MobiDBLite consensus disorder prediction 262 277 - -
Mepo7g01266 396 MobiDBLite consensus disorder prediction 138 158 - -
Mepo7g01266 396 FunFam Basic helix-loop-helix transcription factor 181 256 - -
Mepo7g01266 396 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 190 241 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01266 Mepo-Chr7 20312448 20314551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01266 41 396 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 60.539 1.41e-141 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo7g01266 HLH 8.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01266 K26213 - gmx:100813515 541.191