Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01264 ATGCTCATGAAGTATTTCACTCTAGTTTACACTCATTTGATATGGGTGTTAGATTTCTTTCTCTTCTATCCCTTTTACAATCTCTATGATCCTCACTTGCCAGACATTGGAGAAGAGGTTTCTAGGTTACATGATGAATCAACTCTTGACACAAAGGAATATGTTGATTGTGCTGTGTGTCTTAGCAAAATTGGAGAAGGAGAGGTTACAAGAGTACTGAGGTGTGAACATGTCTTTCACAAAGATTGTGTAGATCAATGGGTGAGTTTAATAAATCCCACTTGTCCACTTTGCAGAAAAGCAGTTGGTCCAAGAAGGATTATTAGTGAGTTTGGAGCAGAAGTTTTATTTTTTGAGTTTTGTTCAGTTCATGCAAATGACGACAATGACACTTGGTGGCTACGCTGA 408 0.3799 MLMKYFTLVYTHLIWVLDFFLFYPFYNLYDPHLPDIGEEVSRLHDESTLDTKEYVDCAVCLSKIGEGEVTRVLRCEHVFHKDCVDQWVSLINPTCPLCRKAVGPRRIISEFGAEVLFFEFCSVHANDDNDTWWLR 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01264 135 PANTHER - 38 112 - -
Mepo7g01264 135 SUPERFAMILY RING/U-box 56 105 - -
Mepo7g01264 135 Pfam Ring finger domain 56 99 IPR001841 -
Mepo7g01264 135 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 106 IPR013083 -
Mepo7g01264 135 ProSiteProfiles Zinc finger RING-type profile. 57 99 IPR001841 -
Mepo7g01264 135 SMART ring_2 57 98 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01264 Mepo-Chr7 20277766 20278173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01264 56 102 C3H Transcription Factor Family AT1G15100 59.574 1.18e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01264 K16282 - sind:105156745 116.701