Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01263 ATGCTCATGAAGTATTTCACTCTAGTTTACACTCATTTGATATGGGTGTTAGATTTTCTTCTCTTCTATCCCTTTTACAATCTCTATGATCCTCACTTGCCAGACATTGGAGAAGAGGTTTCTAGGTTACATGATGAATCAACTCTTGACACAAAGGAATATGTTGATTGTGCTGTGTGTCTTAGCAAAATTGGAGAAGGAGAGGTTACAAGAGTACTGAGGTGTGAACATGTCTTTCACAAAGATTGTGTAGATCAATGGGTGAGTTTAATAAATCCCACTTGTCCACTTTGCAGAAAAGCAGTTGGTCCAAGAAGGATTATTAGTGAGTTTGGAGCAGAAGTTTTATTTTTTGAGTTTTGTTCAGTTCATGCAAATGATGACAATGACACTTGGTGGCTACGCTGA 408 0.3775 MLMKYFTLVYTHLIWVLDFLLFYPFYNLYDPHLPDIGEEVSRLHDESTLDTKEYVDCAVCLSKIGEGEVTRVLRCEHVFHKDCVDQWVSLINPTCPLCRKAVGPRRIISEFGAEVLFFEFCSVHANDDNDTWWLR 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01263 135 Pfam Ring finger domain 56 99 IPR001841 -
Mepo7g01263 135 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 106 IPR013083 -
Mepo7g01263 135 ProSiteProfiles Zinc finger RING-type profile. 57 99 IPR001841 -
Mepo7g01263 135 PANTHER - 6 112 - -
Mepo7g01263 135 SMART ring_2 57 98 IPR001841 -
Mepo7g01263 135 SUPERFAMILY RING/U-box 56 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01263 Mepo-Chr7 20268078 20268646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01263 56 102 C3H Transcription Factor Family AT1G15100 59.574 1.09e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01263 K16282 - sind:105156745 118.242