Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01249 ATGGATGTTGATTCGCAGCCAGGTATGGAGGAAACAATTTTGGTTGGTGATGATCTAATGATGGGTCCTCCATCACCAATAGTACCACCAGAAATAGCCTCTCATGTGCTTCAAGGTGTTGATCTGTGTGATGGAATTCTAAGAAATCTATTTTTGTGCTTGCAAATCAACGACATTGAACCATTCTGTCAAGACGAGATTGCTCTATATAAACAATGTGCTGAAAGAAGGGATAAGGAGATAAGGAAGCGGCTTCAAGATAGTGAATTCAAATTGGGTTCGTCAATGCCTTTAGATGCAGCCAAGGAGAGGTCTACTCAGCTTGAGGCAGAAGTTACATCATTGGAGAGGCGCTTGATTCTTGCTAGTGGAGTTCAGGGCATTGAAGGTTTCCGCACAAGATGGAGCTTGCACGGCCGCCTTACTGACTCCAATTCCGTTTCAGAGCTTCACCTTCAACATACATACATCGCGGTAGCAGCAATATCCCAATCTAACCAGCTAAAAATGAAGATCATCGCTGCTTATTTGTTGGCTGTTTTGGGCGGTAACGCTGTCCCTTCCGCTGATGATATCAAAACCATCCTCTCTTCAGTTGGAGTTGAGGCCGAGGACTCAAATATTGAGTTGCTTTTGAGTGAAGTCAAGGGCAAGGATTTTGCCGAGCTAATTGCTAGTGGCAGAGAGAAGTTGGCTTCAGTGCCTTCTGGTGGAGGCGCTGTTGCTGTTGCTGCTTCTGGTGGAGGTGCTGCAGCTGCTGCTGCACCAGCTGCCGAAGCAAAGGAGGAAAAGAAGGTTGAAGAAAAGGAAGAGTCCGATGATGACATGGGATTTAGCTTGTTCGACTAA 849 0.4594 MDVDSQPGMEETILVGDDLMMGPPSPIVPPEIASHVLQGVDLCDGILRNLFLCLQINDIEPFCQDEIALYKQCAERRDKEIRKRLQDSEFKLGSSMPLDAAKERSTQLEAEVTSLERRLILASGVQGIEGFRTRWSLHGRLTDSNSVSELHLQHTYIAVAAISQSNQLKMKIIAAYLLAVLGGNAVPSADDIKTILSSVGVEAEDSNIELLLSEVKGKDFAELIASGREKLASVPSGGGAVAVAASGGGAAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01249 282 Gene3D - 169 227 IPR038716 -
Mepo7g01249 282 CDD Ribosomal_P2 170 282 IPR044076 GO:0002182|GO:0003735|GO:0022625
Mepo7g01249 282 Pfam 60s Acidic ribosomal protein 187 281 - -
Mepo7g01249 282 MobiDBLite consensus disorder prediction 258 272 - -
Mepo7g01249 282 Coils Coil 98 118 - -
Mepo7g01249 282 PANTHER OS01G0191000 PROTEIN 1 147 - -
Mepo7g01249 282 Hamap 50S ribosomal protein L12 [rpl12]. 171 282 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mepo7g01249 282 MobiDBLite consensus disorder prediction 254 282 - -
Mepo7g01249 282 FunFam 60S acidic ribosomal protein P2 167 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01249 Mepo-Chr7 20085676 20092716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01249 170 239 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 78.571 1.51e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01249 - - gmx:100802417 270.396