Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01231 ATGGCTCCGTCGCCAGCTCCGGTGGAAAACAACGGAGAAACAACCACAACCACCGTTGCAACACCCACCCTTGAGTCTCAGAGATCTATTCCTACGCCGTTTCTGACAAAAACATATAACCTTGTCGAAGATAAATCTATCGACGAAGTTATTTCGTGGAACGAAGATGGATCCACGTTTATTGTTTGGAACCCTACCGTCTTTGCTAGTAACTTGCTTCCTAAATATTTCAAACACAATAATTTCTCCAGCTTTGTTCGTCAACTCAATACTTACGGATTTAGAAAAGTAGTACCTGACAGGTGGGAATTTTCAAATGAGTATTTTCGAAGAGGAGAAAAACGGCTTCTATGTGAAATTCAACGGAGGAAGATCTGTTCTCCCACACCTTCACCGTCGTCTATGTCTGTTTCTGCTGCTGCAGTAGCAGCAGAAACTACAACAACGACGGTTGCAGTTCCTTCACCGATGCCGTTGACGATAATACCAACAGCGATGCCGATGATATCACCGTCAAACTCCGGTGAAGAACAAGTGATATCCTCAAGTTCTTCACCGGCACGAGCACCAGCGGAGCTTCTCGACGAAAACGAAAGATTGAGGAAAGAGAACAGTTTATTGAATAAAGAGCTTGCTGAGATGAGATTGCTTTGTAACAATATATACTCTCTCATGTCAAATTTTGCAAACAGTAACAGTCAAACAGACGGTGGTGCGCAGGGAAGTCGAGAATCCGGTATGACGGCGGTGAATCGGAAACCGCCGGCGCTGGATTTGATGCCGGCGGTGGAAAAACGGAGCTCCGGCGAGGAATTAAATCCGAAGATATTCGGTGTAGCGATTGGAACAAAACGAGTAAGAGAAAACGGTTGTGAAAATGGTGAAAGAGAGGATGATACGCTGTTGCGGCTACATCAACCTGGTTCTACGGATGTGAAATCTGAACCGTTGGATTGTTCGGATCGTGACAATGATCGAACATCGTGGTTGAATCAGAGCCGTAGAAACAATCAGAGTTTATGTAAATGA 1029 0.448 MAPSPAPVENNGETTTTTVATPTLESQRSIPTPFLTKTYNLVEDKSIDEVISWNEDGSTFIVWNPTVFASNLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNEYFRRGEKRLLCEIQRRKICSPTPSPSSMSVSAAAVAAETTTTTVAVPSPMPLTIIPTAMPMISPSNSGEEQVISSSSSPARAPAELLDENERLRKENSLLNKELAEMRLLCNNIYSLMSNFANSNSQTDGGAQGSRESGMTAVNRKPPALDLMPAVEKRSSGEELNPKIFGVAIGTKRVRENGCENGEREDDTLLRLHQPGSTDVKSEPLDCSDRDNDRTSWLNQSRRNNQSLCK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01231 342 SUPERFAMILY "Winged helix" DNA-binding domain 31 123 IPR036390 -
Mepo7g01231 342 MobiDBLite consensus disorder prediction 232 247 - -
Mepo7g01231 342 MobiDBLite consensus disorder prediction 315 329 - -
Mepo7g01231 342 Pfam HSF-type DNA-binding 34 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo7g01231 342 SMART hsfneu3 30 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo7g01231 342 ProSitePatterns HSF-type DNA-binding domain signature. 73 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo7g01231 342 MobiDBLite consensus disorder prediction 8 25 - -
Mepo7g01231 342 MobiDBLite consensus disorder prediction 232 253 - -
Mepo7g01231 342 PRINTS Heat shock factor (HSF) domain signature 34 57 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo7g01231 342 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo7g01231 342 PRINTS Heat shock factor (HSF) domain signature 85 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo7g01231 342 FunFam Heat stress transcription factor B-4 26 124 - -
Mepo7g01231 342 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 28 266 IPR027725 -
Mepo7g01231 342 MobiDBLite consensus disorder prediction 306 342 - -
Mepo7g01231 342 Gene3D - 26 124 IPR036388 -
Mepo7g01231 342 MobiDBLite consensus disorder prediction 1 25 - -
Mepo7g01231 342 Coils Coil 197 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01231 Mepo-Chr7 19833362 19834509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01231 26 341 HSF AT5G62020 47.774 2.07e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo7g01231 HSF_DNA-bind 7.8e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01231 K09419 - gmx:100812267 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01231 7 19833362 19834509 Mepo7g01231 7 19833362 19834509 ECH
Mepo7g01231 7 19833362 19834509 Mepo4g04268 4 52453225 52454544 PCT