Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01229 ATGGCTTCGTTGAAGGATGGTAGAGATTCAGTATCTGGAGATGTTGAAGTTGCCCTAGCGACAAAGAAGAAGAAACGTGGAAGAGAGAGTAATGCGAAGAAGAAGGAAGCTTTAGAGAATGATGAAGAAACTGTTAAAGGTTCTTCTTCTGCTGATCCAAGAAAAAAACGTGGTAGAAAGAAAAAACTGAAGAAGGAAGAAGTAGTGAAGAAGAAGGAAAATCGAGTTAGGGAAAGGAAGATAGTTTCTGATGAAAAACATTGTGCCAAAGAGAAGAAAAAGGAAAACCGTGGTAGGAAAAGAAAGATAATTTTTAGTTCTGAAGCTGTGAAAGAGGTGGAAAATGATGGTTTTGTGAAGAAGGAGAAGAAGGACAATAATGCTGGAAAAATGAAACTTGATTGCATGCATAAGGAGACTAAGAACAAGACAGAAACCAAGAAGGATCATGACATTGAGTTCTCCAAGTATATGCTTAAATACCTTCTTCCATATTTAAGAGAATTAGATCTAGAACAAATGGCTGAGAAGGAGATAGAAGCCAATATACAAGGGCTCTCACACTCTGATGAGCTAAAAATAGATGTAGCAGATTGCTCTAAAGACGAGTGTGCATACTGTGACAACTGCCAAACCTTAATATTTGACTTCCACAGAAGCTGTACAAAATGCTCTTTTGACCTTTGTCTCCGCTGTTGCTCTGAGCTTCGTCGTGGGGAGCTTCTAGGTGGTGCAGATCCAGTTGAGTTTGAGGTTATCAACCAAGGGCAAGATTATCTGCATGGTGGAAATGAAGAGATAACAATAACCATAGAAATTGAATCTCATGCTGCCACCCAGCCTGAATGGTCAAAATCTGGGTGGCATGCAGGACGCGATGGTAGTATTCGCTGTCCAAAAGCCAATAATGAATGTGATCATGGTTTCCTTGAGTTGAGAAGAATGTTTCCGCCAAATTGCATCTCTGAGTTGGTGTGTAAAGCAGAACAACTTAAAGAAACCATTGAACTTGATGATAAAGAGGAGACTCTTGATAATGGTTGCTCTTGTTTGAAGCCTGTTAAGAAGAAAGATGATATACCGAATGATCCAGGGAAGGTGGCTTTTCGTGAAGATTCCGGTGAAATTTTTTTATATTGTCCTAGGGCTAAAGATCTACAAAATCATGAGAAGGATTTAAGACATTTTCAATGGCACTGGAGAAAAGGGGAGCCTGTAATTGTCAGCAACGTACTTGAATCAAGCACATCTGGTATAAGCTGGGAACCGCTTGTCATGTGGCATGCATTTCATCAGATAAGTGATACCAATCACAATTCAGTTTCGGATGTGAAGGCAATTGATTGCTTAACTTGGTGCCAGGGATATATTAGTGTCCACGATTTCTTTACCGGGTACACAAATGGTCGCAAGGATAAGCTCGATTGGCCTCAGCTATTGAAATTGAATGATCAGCCTCCTAATTTGTTTGAGAAAAGTTTGCCACGCCATTGTGCCGAGCTCATATCTTCCCTGCCGTATAAAGAATATACGGATCCTTTCAAAGCTGGTCTTAACCTTGCTTTGAAGCTGCCTAATAATGTTCAGATGGGACTTGAAACATATTTTGCTTATGGATTTGCTGAGGAGCTCGGGCGGGGTGATTCTGTGGCTAAGCTCCATTATGATATGTCTGATGTAGTAAATGTATTGACTCATATTGCTAAAGTGGAACTCGAATCTGTGAGTATTGCTGCAATTAAGAAATTGAAAGAAAAGCACCTTGAGCAAGACAAGAGTGAGTTACTTGATAATCCGTCTTCTCCCGTAATTGCTTCAGATGAGCAATATAGTGTTCGAGTCGTGGAAAATGAAAGTGGACCAGTCATGGAAAATGGAAGTGGATTACGTGATACGAAGGTGGTTGATTCAGTTCATCAAGAAAATAGTTTAGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTAAATTGAAGGAATATCTGAAGAAGCATTTCAGAGAGTTCAGGCATATCTATTGCTCTCCTTTAAAGAAGGTTTTTCACCCCATCCATGATCAGACCTTTTATCTCACTAACAATCATAAGAAGAGGCTTAAGGAGGAGTATGGAATTGAGCCTTGGAGTTTTGTTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCCCACCAAGTCAGAAATCTGAAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGCGAGTGCTTGCGTTTTACAGAGGAAATCCGTAAACTTCCAGTAAATCACTGTTCCACAGAAGACAAATTGGAGGTGAAGAAAATGATTATACATGCTATGCTTGATGTGGTAGAAAAGTTGGAGAAAGCAAGGTCTGAAGAAACCGATGTTCCATCATAA 2409 0.4022 MASLKDGRDSVSGDVEVALATKKKKRGRESNAKKKEALENDEETVKGSSSADPRKKRGRKKKLKKEEVVKKKENRVRERKIVSDEKHCAKEKKKENRGRKRKIIFSSEAVKEVENDGFVKKEKKDNNAGKMKLDCMHKETKNKTETKKDHDIEFSKYMLKYLLPYLRELDLEQMAEKEIEANIQGLSHSDELKIDVADCSKDECAYCDNCQTLIFDFHRSCTKCSFDLCLRCCSELRRGELLGGADPVEFEVINQGQDYLHGGNEEITITIEIESHAATQPEWSKSGWHAGRDGSIRCPKANNECDHGFLELRRMFPPNCISELVCKAEQLKETIELDDKEETLDNGCSCLKPVKKKDDIPNDPGKVAFREDSGEIFLYCPRAKDLQNHEKDLRHFQWHWRKGEPVIVSNVLESSTSGISWEPLVMWHAFHQISDTNHNSVSDVKAIDCLTWCQGYISVHDFFTGYTNGRKDKLDWPQLLKLNDQPPNLFEKSLPRHCAELISSLPYKEYTDPFKAGLNLALKLPNNVQMGLETYFAYGFAEELGRGDSVAKLHYDMSDVVNVLTHIAKVELESVSIAAIKKLKEKHLEQDKSELLDNPSSPVIASDEQYSVRVVENESGPVMENGSGLRDTKVVDSVHQENSLDGALWDIFRREDVPKLKEYLKKHFREFRHIYCSPLKKVFHPIHDQTFYLTNNHKKRLKEEYGIEPWSFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECLRFTEEIRKLPVNHCSTEDKLEVKKMIIHAMLDVVEKLEKARSEETDVPS 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01229 802 Gene3D Cupin 382 768 - -
Mepo7g01229 802 ProSiteProfiles JmjC domain profile. 474 760 IPR003347 -
Mepo7g01229 802 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 16 796 IPR045109 GO:0032454|GO:0033169
Mepo7g01229 802 SMART cupin_9 494 760 IPR003347 -
Mepo7g01229 802 MobiDBLite consensus disorder prediction 67 92 - -
Mepo7g01229 802 SUPERFAMILY Clavaminate synthase-like 392 787 - -
Mepo7g01229 802 CDD cupin_RmlC-like 683 744 - -
Mepo7g01229 802 MobiDBLite consensus disorder prediction 18 52 - -
Mepo7g01229 802 MobiDBLite consensus disorder prediction 1 98 - -
Mepo7g01229 802 Pfam JmjC domain, hydroxylase 637 743 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01229 Mepo-Chr7 19811695 19817296 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo7g01229 JmjC 3.3e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01229 K15601 - gmx:100780803 818.535