LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo7g01212	ATGGCTATGCTTCAATCATCCATCTCTTCTTCCTCTTCCTTCACCTATCACGTGTTCCTTAGCTTTAGAGGTCGTGACACTCGCTATGGTTTTACTGGAAATCTCTACAGAGCTCTTCGTGACAAGGGAATCCGCACCTTCATCGATGACAGGGAGCTTCAAGGAGGTGACGAAATAACACCATCACTTCTCAAGGCCATTAAAGAGTCTAGGATTTTCATTCCCGTCTTGTCTATCAATTATGCTGCTTCTTCATTTTGCTTGAACGAACTTGTCCACATCATTCACTGCTTCAAGGAATATGGGCGCCTAGTTTTGCCAATTTTCTATGATGTGGAACCTTCTCACGTGCGACATCAAGATGGAAGTTATGGTAAAGCACTTGCTGAGCATATTGAGAGGTTCCAAAATAGCAAGGATAGCATAGAGAGGTTGCAGAAATGGAAGATGGCTCTTACTCAAACTGGTAACTTCTCTGGCCACCATTTCAATCCTAGGAATGGATATGAATGCGAGTTTATTGAGAAGATAGTCAAATATGTATCTAACAAGATCAATCATGTTCCTTTATATGTTGCCGATTACCCTGTTGGTATCGAGTCTAGGGTCCTAAAAGTAAATTCACTTATGGATGTTAGATCTAACGGTGAAGTTCAGATGCTAGGGATCTACGGGACTGGAGGAATGGGAAAGACAACACTTGCCAGAGCAGTTTATAATTCCATAGCCGATCAATTTGATGATTTGTGTTTTCTTCACAATGTAAGGGAGAATTCAGCTAAATATGGTTTAGAGCATCTGCAGGGAAAGCTTCTTTCCAAATTAGTTGAATTGGACATTAAGTTAGTAGATGTCAACGAGGGAATTCCAATCATAAAGCAAAGGCTTAACCGAAAGAAGGTTCTGTTGATTCTAGATGATGTTCACGAGCTGAAGCAATTGCAGGTTTTGGCTGGAGGACTTGATTGGTTTGGTCCTGGTAGTAGAGTTATCATTACCACTCGAGACGAACAATTGCTAGCCGGTCATGGGATTGAAAGAGCATATGAAATAGATAAGTTAAATGAGAAAGAAGCTCTTGAATTGTTGAGGTGGAATGCTTTCAAACATAACAAAGTCAATCCAAATTTCGACAACGTTTTACACCTCGCAGTAACTTATGCTGCAGGCCTTCCATTGGCCTTAGAAGTAGTGGGTTCGAACTTGTTTGGAAAGAATATAGAAGAATGGAAATCTGCATTAAATCAGTATGAAAGGATTCCCGTTAAAAAGATCCAAGAGATACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGATGAGAAGAATGTTTTTCTTGACATTTCTTGTTTCTTAAAAGGATGTGATTTGAAAGAAGTTGAAGATATACTTCATGCTTATTATGGTAGCTGCATGAAACATCAAATTAGAGTGTTGGATGAAAAATCTCTCATAAAGATCAACTGGTACCAGGGGAATTATGTTGTGACATTACACGCCTTGATAGAGAAAATGGGTAAAGAAATTGTCCGCAAAGAGTCTCCAAAAGAGCCTGGAAGACGTAGTAGGTTATGGTTCCATAAAGATATAACTTATGTCTTAGAAGAAAATAAGGGATCAACTGAAATTGAAATTATATATTTGGAATTCCCGTTATGCGAGGAAAAGGTGGTAGATTGGAAGGGAGATGAACTCAAGAAGATGCAAAACCTCAAAACACTTATTGTTAAGAATGGTAGCTTTTCCAAAGGTCCTATACATCTTCCTAATAGTATTAGAGTATTGGAATGGCATAAATATCCTTCACCGTTCGTACCATCTGATATTTTCCCGAAGAAACTTTCTATATGCAAACTACAGCAAAGTGACTTTACATCATTTGAGTTGCGTGGCGCAATGAGGTTTGTGAATATGAGAGAGTTAAATCTAGACAAATGTCAATATTTAACACGGATACATGACATCTCCAATCTCCCAAATTTAGAAATATTTTCATTTAAAAATTGTAAGAATTTAATTGAAATTCACAAATCTGTTGGGTTCCTAAAGAAACTTGAAATCTTGAACGCTGAAGGTTGCAGCAAGCTCATGAGTTTCCCACCTCTGAAGTCGATCTCTCTTCAAGAACTGAGGCTTTCATATTGTGAGAGTCTTAAGGCTTTTCCAGAAATATTAGGAGAGATGAAGAATATAACACGTATTCGTTTGTTTGACACTTCCATTGAAAAACTGTCTGTTTCATTTCAAAATCTCACGGGGCTTCTTAACTTAATTATAATAGGAAATGGAATGCTTAGATTGCCAAGTAGTATTTTTAGGATGCCAGCTCTGTCAAAAATAAATTTTGAGGATTGTCTACTTCCAAAGAAAAATGATAAATTGAGTTCCATGGTGTTTACGAGCCGAGCAGTAGACATCGAATTGATAAAATGCAACTTATCAGATGAATTTCTTCCAATACTTGTCATGTGGTCTGCTAATGTGAAAACTATAGACCTATCAGGAAATAATTTCACAATTCTTCCAGAATGCATGAAAGATTGTCGCTTTTTGTGGTTTCTTAAATTGGATGATTGCAAGTGCCTTCGAGAAATTAGAGGGATTCCACCAAATTTAAAACACTTGTCTGCAATACGCTGCAAATCATTGATTTCCTCGTGCAAAAACATGCTATTGAATCAGGATCTGCATGAGGCTGGACAAACCATGTTTTGTTTGCCAGGATTTGCAAGGATTCCAGAGTGGTTTGAGCACCAAAACACGGGACATACAATTTCGTTTTGGTTTCGTAACAAGCTCCCTTTCATGGCTCTCTTTTTTTCTACTAAATCAGTTGCTACAACCAGGACTAATAATTTTGATATTGATATACCCACTCTAATCATCAATGACAATGTATATGGTTTGCCAGTTCTAATGATTGATTTTGGTCTAATGTCGACTCATCACATATATTTGTGTGATATGAAGATGGTATTTATTCAAATCCACAACATGGACAAAATAATTTTAGAAAATGAATGGATCTATGCAGAGGTTACATGTGAACATCCGAAGGTGGAACCACTAACAGAAATTGGAATCCATTTTTTCAAACAGAAAAATAACATGGATGATATTCAATTCACCAATCCTTATGAAAAGATAAAATTAAATGATAATGATAATGATGGTGATGATGTTTTTTATGACGTTGACGATGTTCTTGATGATGATAATGATGGTGTCTTTTATGATGTTCTTGATGATGAAGACAACCACCATTCACAATAG	3270	0.3697	MAMLQSSISSSSSFTYHVFLSFRGRDTRYGFTGNLYRALRDKGIRTFIDDRELQGGDEITPSLLKAIKESRIFIPVLSINYAASSFCLNELVHIIHCFKEYGRLVLPIFYDVEPSHVRHQDGSYGKALAEHIERFQNSKDSIERLQKWKMALTQTGNFSGHHFNPRNGYECEFIEKIVKYVSNKINHVPLYVADYPVGIESRVLKVNSLMDVRSNGEVQMLGIYGTGGMGKTTLARAVYNSIADQFDDLCFLHNVRENSAKYGLEHLQGKLLSKLVELDIKLVDVNEGIPIIKQRLNRKKVLLILDDVHELKQLQVLAGGLDWFGPGSRVIITTRDEQLLAGHGIERAYEIDKLNEKEALELLRWNAFKHNKVNPNFDNVLHLAVTYAAGLPLALEVVGSNLFGKNIEEWKSALNQYERIPVKKIQEILKVSFDALEEDEKNVFLDISCFLKGCDLKEVEDILHAYYGSCMKHQIRVLDEKSLIKINWYQGNYVVTLHALIEKMGKEIVRKESPKEPGRRSRLWFHKDITYVLEENKGSTEIEIIYLEFPLCEEKVVDWKGDELKKMQNLKTLIVKNGSFSKGPIHLPNSIRVLEWHKYPSPFVPSDIFPKKLSICKLQQSDFTSFELRGAMRFVNMRELNLDKCQYLTRIHDISNLPNLEIFSFKNCKNLIEIHKSVGFLKKLEILNAEGCSKLMSFPPLKSISLQELRLSYCESLKAFPEILGEMKNITRIRLFDTSIEKLSVSFQNLTGLLNLIIIGNGMLRLPSSIFRMPALSKINFEDCLLPKKNDKLSSMVFTSRAVDIELIKCNLSDEFLPILVMWSANVKTIDLSGNNFTILPECMKDCRFLWFLKLDDCKCLREIRGIPPNLKHLSAIRCKSLISSCKNMLLNQDLHEAGQTMFCLPGFARIPEWFEHQNTGHTISFWFRNKLPFMALFFSTKSVATTRTNNFDIDIPTLIINDNVYGLPVLMIDFGLMSTHHIYLCDMKMVFIQIHNMDKIILENEWIYAEVTCEHPKVEPLTEIGIHFFKQKNNMDDIQFTNPYEKIKLNDNDNDGDDVFYDVDDVLDDDNDGVFYDVLDDEDNHHSQ	1089

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo7g01212	1089	SUPERFAMILY	Toll/Interleukin receptor TIR domain	9	160	IPR035897	-
	Mepo7g01212	1089	SUPERFAMILY	L domain-like	512	895	-	-
	Mepo7g01212	1089	Gene3D	Ribonuclease Inhibitor	727	900	IPR032675	-
	Mepo7g01212	1089	SMART	till_3	15	158	IPR000157	GO:0007165
	Mepo7g01212	1089	SUPERFAMILY	"Winged helix" DNA-binding domain	423	533	IPR036390	-
	Mepo7g01212	1089	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	181	447	IPR027417	-
	Mepo7g01212	1089	PRINTS	Disease resistance protein signature	388	402	-	-
	Mepo7g01212	1089	PRINTS	Disease resistance protein signature	295	309	-	-
	Mepo7g01212	1089	PRINTS	Disease resistance protein signature	220	235	-	-
	Mepo7g01212	1089	PRINTS	Disease resistance protein signature	679	695	-	-
	Mepo7g01212	1089	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	16	865	IPR044974	GO:0006952
	Mepo7g01212	1089	ProSiteProfiles	TIR domain profile.	14	185	IPR000157	GO:0007165
	Mepo7g01212	1089	Gene3D	-	9	188	IPR035897	-
	Mepo7g01212	1089	FunFam	Disease resistance protein (TIR-NBS-LRR class)	12	187	-	-
	Mepo7g01212	1089	Pfam	NB-ARC domain	214	433	IPR002182	GO:0043531
	Mepo7g01212	1089	Gene3D	-	353	437	IPR042197	-
	Mepo7g01212	1089	Gene3D	Ribonuclease Inhibitor	554	726	IPR032675	-
	Mepo7g01212	1089	Pfam	TIR domain	16	188	IPR000157	GO:0007165
	Mepo7g01212	1089	Gene3D	-	189	346	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo7g01212	Mepo-Chr7	19545661	19549489	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo7g01212	11	798	WRKY Transcription Factor Family	AT4G12020	27.628	3.06e-67	246

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo7g01212	-		-	tpra:123910163	1161.36