Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01194 ATGTTTCCATCTAAGAACCCTTCCTCTTCACAACCCACTTCCTCAAAACCTTCCTCTTCCTCACATACAATATCACTTCCAAATTTAGAGGTCTCTCGTGGGATGTCAGTTACCAACGACGAGGTTCGGTTAGCTGCAACTACCCCGAAGAAGCGTGCAGGGAGGAAGAAGTTCAAGGAGACACGCCACCCGGTGTATAGGGGTGTGAGGAGGAGGAACTTAGATAAATGGGTTTGTGAAATGAGGGAGCCTAACAAGAAGACTAAGATTTGGCTTGGGACTTTTCCAACGGCCGAGATGGCAGCACGAGCCCATGATGTCGCAGCATTGGCATTGAGAGGTCGCAACGCCTGTCTGAACTTTGCTGACTCTGCCTCGCGGCTTCCTGTTCCAGCCACTACAGAGACAAGAGATATACAAAAGGCGGCTGCAGAAGCTGCCGAGGCTTTCAGACCAGACAAGACTTTAACGACTGATGACAGTGACACTGCTGTAGCTGCAGCCGCCACAGAGGAGCAGCTGATATTTAGTTTGGAAGAGGAAGAAGAAGAAGAGGAGGAAGTGGTGAACATTCCAGAGTCATTGAGGAATATGGCTCTAATGTCCCCTACACATAGCTTGGGGCATGAGTTTGAACATATTGATCATGGAGACTTTCAAGATGATGAGGTGTCACTATGGAGTTTTTCAGTTTGA 696 0.4842 MFPSKNPSSSQPTSSKPSSSSHTISLPNLEVSRGMSVTNDEVRLAATTPKKRAGRKKFKETRHPVYRGVRRRNLDKWVCEMREPNKKTKIWLGTFPTAEMAARAHDVAALALRGRNACLNFADSASRLPVPATTETRDIQKAAAEAAEAFRPDKTLTTDDSDTAVAAAATEEQLIFSLEEEEEEEEEVVNIPESLRNMALMSPTHSLGHEFEHIDHGDFQDDEVSLWSFSV 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01194 231 Pfam AP2 domain 64 114 IPR001471 GO:0003700|GO:0006355
Mepo7g01194 231 SUPERFAMILY DNA-binding domain 65 124 IPR016177 GO:0003677
Mepo7g01194 231 CDD AP2 66 124 IPR001471 GO:0003700|GO:0006355
Mepo7g01194 231 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Mepo7g01194 231 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Mepo7g01194 231 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
Mepo7g01194 231 Coils Coil 167 187 - -
Mepo7g01194 231 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 14 229 IPR045277 GO:0003700
Mepo7g01194 231 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Mepo7g01194 231 MobiDBLite consensus disorder prediction 1 58 - -
Mepo7g01194 231 Gene3D AP2/ERF domain 65 123 IPR036955 GO:0003700|GO:0006355
Mepo7g01194 231 FunFam Ethylene-responsive transcription factor 2 64 123 - -
Mepo7g01194 231 PIRSF PTI6 139 231 IPR017392 GO:0003700
Mepo7g01194 231 PIRSF PTI6 8 143 IPR017392 GO:0003700
Mepo7g01194 231 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01194 Mepo-Chr7 19050613 19051482 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01194 43 229 AP2-EREBP Transcription Factor Family AT5G51990 54.774 4.18e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo7g01194 AP2 8.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01194 - K09286 psat:127130221 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01194 7 19050613 19051482 Mepo4g04286 4 52653501 52654575 ECH
Mepo7g01194 7 19050613 19051482 Mepo7g01194 7 19050613 19051482 ECH
Mepo7g01194 7 19050613 19051482 Mepo4g04286 4 52653501 52654575 PCT