Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01184 ATGTTTACAGGCAACAACGGGGAGGGGCGGTTAGCGGCAAGTTGCCCAAAAAAACCAGCAGGGAGGAAGAAGTTTAAGGAGACTCGCCACCCGGTGTATAGAGGTGTGAGGAAGAGGAACTTAGACAAATGGGTGTGTGAAATGAGGGAACCGAATAAGAAGACTAGGATTTGGCTAGGGACTTTTCCCACGGCTGAGATGGCTGCACGAGCACACGACGTTGCAGCCATGGCATTAAGGGGCCGCTACGCCTGTCTTAACTTTGCAGACTCGGCGTGGAGGCTTCCTATTCCTGCCTCCGCTGAGGCAAAAGACATTCAAAGGGCGGCTGCAGAAGCTGCCGAGGCTTTCAGACCACACAAGACTTTAATGACTACTGACATTGACACGGTTGTGGCTGTTGTCGTTGCGGTGGAAGAAGAGGAAGAAGTGTTGAATATGTTTTGTGTTGAAGTCGAAGAAGAAGAGGAAGTGTTGAATATGCCAGAGTTGTGGAGGAATATGGCACTAATGTCCCCTGCACATAGTTTTGAGCATGAGTATGAAGATTTTGAAGAACAAGACTTTCAAGATGAAGAGGTATCACTATGGAACTTCTAA 600 0.4833 MFTGNNGEGRLAASCPKKPAGRKKFKETRHPVYRGVRKRNLDKWVCEMREPNKKTRIWLGTFPTAEMAARAHDVAAMALRGRYACLNFADSAWRLPIPASAEAKDIQRAAAEAAEAFRPHKTLMTTDIDTVVAVVVAVEEEEEVLNMFCVEVEEEEEVLNMPELWRNMALMSPAHSFEHEYEDFEEQDFQDEEVSLWNF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01184 199 SUPERFAMILY DNA-binding domain 32 91 IPR016177 GO:0003677
Mepo7g01184 199 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 9 198 IPR045277 GO:0003700
Mepo7g01184 199 FunFam Ethylene-responsive transcription factor 2 31 90 - -
Mepo7g01184 199 CDD AP2 33 91 IPR001471 GO:0003700|GO:0006355
Mepo7g01184 199 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Mepo7g01184 199 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Mepo7g01184 199 Gene3D AP2/ERF domain 32 90 IPR036955 GO:0003700|GO:0006355
Mepo7g01184 199 MobiDBLite consensus disorder prediction 1 25 - -
Mepo7g01184 199 Pfam AP2 domain 31 81 IPR001471 GO:0003700|GO:0006355
Mepo7g01184 199 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Mepo7g01184 199 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01184 Mepo-Chr7 18723017 18723616 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01184 3 199 AP2-EREBP Transcription Factor Family AT4G25470 56.098 9.03e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo7g01184 AP2 6.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01184 - K09286 mtr:25497241 246.514