Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01179 ATGTTTACTACTAACAACTCTTCCTATTCACACTCCATTTCCTCAGAGGCATCTTCTTCCTACTACAACAAATTACCGGATTCGGAGATACGATTAGCGGCTAGTAACCCGAAGAAGAGAGCAGGAAGGAAGATATTCAAGGAAACTCGCCACTCGGTGTATAGAGGTGTTAGGAAGAGGAACTTAGACAAATGGGTGTGTGAAATGAGGGAGCCCAACACGAAGACTAGAATTTGGCTAGGAACTTTTCCAACAGCCGATATGGCAGCCCGAGCCCATGATGTTGCTGCGATGGCATTGAGGGGCCGCTACGCCTGTCTCAATTTTGCAGACTCGGTGTGGCGGCTTCCTCTTCCAGCAACTTCCTCGATAAAAGATATTCAAAAGGCGGCTGCTGAAGCTGCCGAAGCTTTTAGACCAGACAAGACTTTAATGATTAATGATATTGACACCGTAGGAGCTGTCGTCGCCACAAAGGAGTTGAATATGTTTTGTGTGGAAGTCGAAGAAGAGCAGGAAATGTTGAATATGCCAGAGTTGTGGAGGAATATGGCCCTAATGTCCCCTACACATAGCTTTGGGTATCATGATCAGTATGACGATATTCATGTACAAGACTTTCAAGATGATGAGGACTTTAAAATAAGGTCTATTACCATGAGTTGGGTTCTTACTGCAATTGGAGTTCATTCGCCGCATTTCACCGTAGTATCAAGGATTGTGATCGTTGCCGTGACTGCAAACCATGCTTTTCTATTTCTAGTTTCTTTGTTTCCTTCCTGGCTAGGGAAGGTACAAAAGAAGAATGAACGAAACTGGAGTAGTTATTCTGAATTTACCACTGAAGGATAA 852 0.439 MFTTNNSSYSHSISSEASSSYYNKLPDSEIRLAASNPKKRAGRKIFKETRHSVYRGVRKRNLDKWVCEMREPNTKTRIWLGTFPTADMAARAHDVAAMALRGRYACLNFADSVWRLPLPATSSIKDIQKAAAEAAEAFRPDKTLMINDIDTVGAVVATKELNMFCVEVEEEQEMLNMPELWRNMALMSPTHSFGYHDQYDDIHVQDFQDDEDFKIRSITMSWVLTAIGVHSPHFTVVSRIVIVAVTANHAFLFLVSLFPSWLGKVQKKNERNWSSYSEFTTEG 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01179 283 Pfam AP2 domain 52 102 IPR001471 GO:0003700|GO:0006355
Mepo7g01179 283 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 5 203 IPR045277 GO:0003700
Mepo7g01179 283 ProSiteProfiles AP2/ERF domain profile. 53 110 IPR001471 GO:0003700|GO:0006355
Mepo7g01179 283 Gene3D AP2/ERF domain 53 111 IPR036955 GO:0003700|GO:0006355
Mepo7g01179 283 FunFam Ethylene-responsive transcription factor 2 52 111 - -
Mepo7g01179 283 PRINTS Ethylene responsive element binding protein signature 54 65 IPR001471 GO:0003700|GO:0006355
Mepo7g01179 283 PRINTS Ethylene responsive element binding protein signature 76 92 IPR001471 GO:0003700|GO:0006355
Mepo7g01179 283 SMART rav1_2 53 116 IPR001471 GO:0003700|GO:0006355
Mepo7g01179 283 CDD AP2 52 112 IPR001471 GO:0003700|GO:0006355
Mepo7g01179 283 SUPERFAMILY DNA-binding domain 52 112 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01179 Mepo-Chr7 18643552 18644810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01179 31 202 AP2-EREBP Transcription Factor Family AT5G51990 51.630 1.51e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo7g01179 AP2 3.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01179 - K09286 mtr:25497241 401.749