Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01177 ATGTCAACTCCGAATTCGGAGGTACGATTAGCGGCTAGTAATCCAAAGAAGCGAGCAGGGAGGAAGATCTTCAAGGAAACTCGCCACCCGGTGTATAGAGGTGTGAGGAAGAGGAACTTAGATAAATGGGTTTGTGAAATGAGGGAGCCCAACACGAAGACTAGGATTTGGCTTGGAACATTTCCAACAGCCGAGATGGCAGCCCGAGCCCATGATGTTGCCGCAATGGCATTGAGAGGCCGTGACGCCTGTCTTAATTTCGCAGACTCGGTGTGGCGACTTCCTATTCCAACAACATCCAAGATAAAAGATATTCAAAAGGCGGCTGCCGAAGCTGCCGAAGCTTTTAGACCAGACAAGACTTTAATGATTAATGATATTGACACCGTAGTAGCTGTCGTCGCCACAAAGGAGTTGAATATGTTTTGTGTGGAAGTCGAAGAAGAGCAGGAAATGTTGAATATGCCAGAGTTGTGGAGGAATATGGCCCTAATGTCCCCTACACATAGCTTTGGGTATCATGATCAGTATGACGATATTCATGTACAAGACTTTCAAGATAATGAGGGTGCATACGCCGCATTTCACCGTAATATCAAGGATTGTGATCGTTTCCGTGTGACTGCGAACCTTGCTTTTCTGTGGCTGATTTCTGTCTTTTCTTCCTGGCAAGGAAAGGTACCAGAGAAGAATGAAGGAAACTTAAGCAGAAACCAGTAA 720 0.4569 MSTPNSEVRLAASNPKKRAGRKIFKETRHPVYRGVRKRNLDKWVCEMREPNTKTRIWLGTFPTAEMAARAHDVAAMALRGRDACLNFADSVWRLPIPTTSKIKDIQKAAAEAAEAFRPDKTLMINDIDTVVAVVATKELNMFCVEVEEEQEMLNMPELWRNMALMSPTHSFGYHDQYDDIHVQDFQDNEGAYAAFHRNIKDCDRFRVTANLAFLWLISVFSSWQGKVPEKNEGNLSRNQ 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01177 239 CDD AP2 32 90 IPR001471 GO:0003700|GO:0006355
Mepo7g01177 239 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Mepo7g01177 239 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Mepo7g01177 239 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 5 180 IPR045277 GO:0003700
Mepo7g01177 239 Gene3D AP2/ERF domain 31 89 IPR036955 GO:0003700|GO:0006355
Mepo7g01177 239 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Mepo7g01177 239 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Mepo7g01177 239 Pfam AP2 domain 30 80 IPR001471 GO:0003700|GO:0006355
Mepo7g01177 239 SUPERFAMILY DNA-binding domain 31 90 IPR016177 GO:0003677
Mepo7g01177 239 FunFam Ethylene-responsive transcription factor 2 30 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01177 Mepo-Chr7 18633425 18634476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01177 9 178 AP2-EREBP Transcription Factor Family AT4G25470 56.742 1.21e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo7g01177 AP2 1.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01177 - K09286 mtr:25497241 340.117