Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01176 ATGATTACTACTAACAACTCTTCCTATTCACACTCCATTTCCTCAAAAGATTTTTCTCCCTTCAACGCATCATCACCAGATTCCGAGGTGCGGTTAGCAGCAAGCAACCCGAAGAAGAGAGCAGGGAGGAAGATATTCAAGGAAACTCGCCACCCGGTCTATAGAGGTGTGAGGAAGAGGAACTTGGATAAATGGGTTTGTGAAATGAGGGAGCCCAACACGAAGACTAGGATTTGGCTAGGAACTTTTCCAACAGCCGAGATGGCAGCCCGAGCCCACGATGTTGCTGCGATGGCATTGAGGGGACGCTACGCCTGTCTCAATTTCGCAGATTCGGTGTGGCGCCTTCCTATACCAGCAACCTCCAAGATAAAAGATATTCAAAAGGCGGCTGCTGAAGCTACCGAAGCTTTTAGACCAGACAATACTTTAATTACTAACAATATTGACACTATCGTAGATGTGGTCGCAACAAAGGAGCTGAATATGTTTTGCGTCGAAGTAGATGAAGAGGAGGAAGTGTTGAATATGCCAGAGTTGTGGAGGAACATGGCGCTATTGTCCCCTACACATAGCTTTGAGTATCATGATCAGTATGACGATATTCATGTACAAGACTTTCAAGATGATGAGGACTGTAAAAAAAAGTCTGTTACCACGACCTGGGCTGTGACTGCAATTGGGGTGCATTCGCCGAATTTCACCATAAAGTCAAGGATCGTGATTGTTGTCGTGACTGCGAACCCTGCTTTTGTATTATCTTTGTTTTTTTCCTGGCAAAGGAAGGTACAAAAGAAGAATAAAGAAAACTTGAATGTTCATATTCTGAATTTACTACTTAAGCAGAAGCCAGATTAA 858 0.4382 MITTNNSSYSHSISSKDFSPFNASSPDSEVRLAASNPKKRAGRKIFKETRHPVYRGVRKRNLDKWVCEMREPNTKTRIWLGTFPTAEMAARAHDVAAMALRGRYACLNFADSVWRLPIPATSKIKDIQKAAAEATEAFRPDNTLITNNIDTIVDVVATKELNMFCVEVDEEEEVLNMPELWRNMALLSPTHSFEYHDQYDDIHVQDFQDDEDCKKKSVTTTWAVTAIGVHSPNFTIKSRIVIVVVTANPAFVLSLFFSWQRKVQKKNKENLNVHILNLLLKQKPD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01176 285 CDD AP2 54 112 IPR001471 GO:0003700|GO:0006355
Mepo7g01176 285 MobiDBLite consensus disorder prediction 1 31 - -
Mepo7g01176 285 Gene3D AP2/ERF domain 53 111 IPR036955 GO:0003700|GO:0006355
Mepo7g01176 285 SMART rav1_2 53 116 IPR001471 GO:0003700|GO:0006355
Mepo7g01176 285 ProSiteProfiles AP2/ERF domain profile. 53 110 IPR001471 GO:0003700|GO:0006355
Mepo7g01176 285 FunFam Ethylene-responsive transcription factor 2 52 111 - -
Mepo7g01176 285 SUPERFAMILY DNA-binding domain 53 112 IPR016177 GO:0003677
Mepo7g01176 285 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 6 203 IPR045277 GO:0003700
Mepo7g01176 285 MobiDBLite consensus disorder prediction 1 46 - -
Mepo7g01176 285 Pfam AP2 domain 52 102 IPR001471 GO:0003700|GO:0006355
Mepo7g01176 285 PRINTS Ethylene responsive element binding protein signature 54 65 IPR001471 GO:0003700|GO:0006355
Mepo7g01176 285 PRINTS Ethylene responsive element binding protein signature 76 92 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01176 Mepo-Chr7 18623662 18624891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01176 7 200 AP2-EREBP Transcription Factor Family AT4G25470 52.970 2.56e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo7g01176 AP2 2.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01176 - K09286 mtr:25497241 407.142