Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01120 ATGCTATTTTCTGTTGGCTACTATTGGCTTAAGAAAAGGGGAAGAAAGAGTCGTAAGACTATTCTTCGAGAAAATTTTGGTGAAGAAAGTGCCACTTTAGAACCACTGCAATTCGATTGGGTGGTAATTGAAGCAGCGACCAACAACTTTTCTAAGGACAATTACATTGGCAAAGGCGGGTTTGGAGAGGTTTACAAGGGTATCCTTCTTGATGGAAGAGAAGTGGCTATAAAAAGGCTTTCAAAAAGTTCTAATCAAGGTGTAGAAGAGTTCAAGAATGAAGTTTTGTTGATAGCCAAGCTTCAACATAGAAATCTAGTGGCTTTTATTGGTTTTTGCCTTGAAGAACAAGAGAAAATACTTATTTATGAATATGTGCCCAACAAGAGTCTTGATTACTTTCTATTTGATTCTCAACAACAAAAGTTGTTAACTTGGGGTGAACGCTTCAACATCATAGGAGGAATTGTTCGAGGGATTCTTTATTTGCATGATCATTCTCGACTCAAAGTTATACATCGGGATCTCAAACCTAGCAATATTCTATTAGACGAAAATATGATTCCTAAAATTTCTGATTTTGGTTTGGCTCGAATTGTTGAAATAAGTCAAGACGAGGGAAGTACAAATAGAATTGTTGGAACATTTGGTTATATGTCTCCGGAATATGCAATGGTCGGACAATTTTCTGAAAAATCCGACATTTACAGTTTTGGAGTTATGCTTTTAGAGATTATTGCTGGAAAGAAGAATAAAAGTTCATTTACTCCACACCATGTTGCTTATGACCTCTTGAATTATGCATGGAGACAGTGGATGGATCAAACACCTTTAAGTATTTTGGACCCAAATATTCAAGAAGATTATTCTACAAATGAAGTCATTAAGTGCATTCAGATTGGTCTATTATGTGTTCAACATGACCCGGATGCTAGACCTTCAATCACGACAGTTTCTTCCTACCTTAGCAGTTATGCAGTTGAATTACCAACTCCACAAGAACCTGCGTTTTTCTTGCATAATAGAACGAATTCAAACGTTCTTGCACAAGAATCAAGTTCTACTCAATCTGCCAATAGTTCTGCACTATTTTCAAACAATCAAATGTTGGCAAGTACTTTAATTCCTTGA 1131 0.3616 MLFSVGYYWLKKRGRKSRKTILRENFGEESATLEPLQFDWVVIEAATNNFSKDNYIGKGGFGEVYKGILLDGREVAIKRLSKSSNQGVEEFKNEVLLIAKLQHRNLVAFIGFCLEEQEKILIYEYVPNKSLDYFLFDSQQQKLLTWGERFNIIGGIVRGILYLHDHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEISQDEGSTNRIVGTFGYMSPEYAMVGQFSEKSDIYSFGVMLLEIIAGKKNKSSFTPHHVAYDLLNYAWRQWMDQTPLSILDPNIQEDYSTNEVIKCIQIGLLCVQHDPDARPSITTVSSYLSSYAVELPTPQEPAFFLHNRTNSNVLAQESSSTQSANSSALFSNNQMLASTLIP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01120 376 Gene3D Transferase(Phosphotransferase) domain 1 126 333 - -
Mepo7g01120 376 SMART serkin_6 50 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo7g01120 376 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 11 125 - -
Mepo7g01120 376 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 367 - -
Mepo7g01120 376 SUPERFAMILY Protein kinase-like (PK-like) 33 361 IPR011009 -
Mepo7g01120 376 CDD STKc_IRAK 56 322 - -
Mepo7g01120 376 ProSiteProfiles Protein kinase domain profile. 50 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo7g01120 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Mepo7g01120 376 ProSitePatterns Protein kinases ATP-binding region signature. 56 78 IPR017441 GO:0005524
Mepo7g01120 376 Gene3D Phosphorylase Kinase; domain 1 12 125 - -
Mepo7g01120 376 FunFam cysteine-rich receptor-like protein kinase 10 126 329 - -
Mepo7g01120 376 Pfam Protein kinase domain 51 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01120 Mepo-Chr7 17354188 17356209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01120 5 355 Receptor kinase-like Gene Family AT4G23140 54.902 8.46e-139 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo7g01120 Pkinase 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01120 - - mtr:25496499 687.182