Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00909 ATGGAAAGAGAATTCCTTGGCTTCAGTTCCAAAAATAGTCCATGGACTACCATGAAAGAAGATGCTCCCAACAAACCAAAAGACCAAGTTAGGAGTTCAGGAATGCAGTGGTCATTTTCAAATAAGGTTTCAAACCTTCCTCAATTCATGTCATTCAAGAATAATACTCATGAAGATAGGTCAAGAAACAGTGTTATGGATCCAGTAGCTTCATCTGGATATATGACTATTTCAACTAAAGATGCTTTTGAATCTAATCAGAAATCATTCTTGGGTGTGACACAGGAAAATTTGGCCATAAATCAAGTAGGAAACAAGCATGGAATTACAATTTATCCTATCCAAAGTTCTGATGCACAATCAGCTTGTAATCAAGAAGCAAGAACATTTTCAGTTTCAAACCAATCTAATCATGTTATTACTGGAATCAACATGGTTAATTCAGTTACAAACTCACAAACTTTTGGTTCAAAATCCTCTGCCACACCTTTATCTGTTCTTCCATCAAAAGGTCCCATAGTTGGCTCTACCGACTTAAGGAGTAGGAATTGTTCCAAATCCAATGGTACTACGCCTGCTCAATTGACCATATTTTATGGTGGTACAGTATGTGTGTATGATGACATCTCTCCTGAGAAGGCTAAGGCTATCATGTTACTAGCTGGAAATGGCACTAAAATGCAGCAAGAAATCTCTATTCCTTCCAAAAAGGATAGTTTCATTATAAGCCAACCCTATCCCTCACCATTGCCAAGTCCTCTTCCAATGACCTCTCATGCAAGTACTCAACCAAGGGGAGGTTCAAGTAGCAACAATGAAGTTACAATAATAAGGTCTTTAGGACCTTCAATTGCCAAGTCCTCTCACAATGACCTATCTCATCTCTCACCATTGCCAAGTTCTCTCCCAATGACCTCTCATACAAGTTCTTATCCCAAGGGAGGTTCAAGTAGCAATAATGGAGCCACAATAATAAGATCTTTAGGACCTTCAAATGTCCCTACAAACCATTTGGAATCTCCTATTGTTGCTACTTCTGTAGGATCAACACTTACAAATGTGATTCAACCAGTTGGCTTGCCTCAAGCGCGAAAAGCATCGCTGACTCGGTTTTTGGAGAAGCGAAAGGAAAGGGCAATGAGCACATCACCATACTATATGAGCAAAAAATCACCTGAATGCAGCACTGGATCAGACAATGCTAGTTTCTCCATTGATTTCTCTGGTTCAAGTACTCAACCACCCACCAATTTGCCTTTAAGAAGAACATGTATGGAAGTGATTAGATAA 1290 0.3922 MEREFLGFSSKNSPWTTMKEDAPNKPKDQVRSSGMQWSFSNKVSNLPQFMSFKNNTHEDRSRNSVMDPVASSGYMTISTKDAFESNQKSFLGVTQENLAINQVGNKHGITIYPIQSSDAQSACNQEARTFSVSNQSNHVITGINMVNSVTNSQTFGSKSSATPLSVLPSKGPIVGSTDLRSRNCSKSNGTTPAQLTIFYGGTVCVYDDISPEKAKAIMLLAGNGTKMQQEISIPSKKDSFIISQPYPSPLPSPLPMTSHASTQPRGGSSSNNEVTIIRSLGPSIAKSSHNDLSHLSPLPSSLPMTSHTSSYPKGGSSSNNGATIIRSLGPSNVPTNHLESPIVATSVGSTLTNVIQPVGLPQARKASLTRFLEKRKERAMSTSPYYMSKKSPECSTGSDNASFSIDFSGSSTQPPTNLPLRRTCMEVIR 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00909 429 MobiDBLite consensus disorder prediction 242 273 - -
Mepo7g00909 429 MobiDBLite consensus disorder prediction 287 332 - -
Mepo7g00909 429 MobiDBLite consensus disorder prediction 255 273 - -
Mepo7g00909 429 Pfam tify domain 191 222 IPR010399 -
Mepo7g00909 429 MobiDBLite consensus disorder prediction 1 32 - -
Mepo7g00909 429 Pfam Jas motif 361 386 IPR018467 -
Mepo7g00909 429 ProSiteProfiles Tify domain profile. 188 223 IPR010399 -
Mepo7g00909 429 SMART tify_2 188 223 IPR010399 -
Mepo7g00909 429 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 116 399 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00909 Mepo-Chr7 14229651 14235894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00909 35 391 Tify Gene Family AT3G17860 38.814 5.69e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mepo7g00909 tify 2.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00909 K13464 - gmx:100807288 426.787