Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo7g00904 | ATGTCTCAAATTCTATGTTCTTTATTCCATATCCAAACCCCATTATCAATGTCATTCATCACCCCCTCACCACCATCTTCTTCCCCTTTCACCATTGCTACCCCTTCAAACCTCACCTTCAAAACAACGCCTCCTTTCCCTCTCTCCTCCACAAGAAACCGCTCCCGTTTTTCAACAGTGGTCAGAGCCAAAGGTGGAAAAGATCACTACTCTACTTTGAATGTCAGCAACAATGCTTCGTTGCAAGAAATCAAGAGTTCTTATAGGAAACTTGCTCGAAAGTACCATCCAGATATGAACAAAAACCCTGGAGCAGAAGAGAAGTTCAAGGAGATTAGTGCTGCATACGAGGTCCTATCAGATGATGAGAAAAGGTCTTTATATGATCGCTTTGGTGAGTCAGGTCTACAAGGAGAAAATGGAGGACCAGCCAGTGCCTCAGAGGTTGATCCTTCTGATTTATTCGATGCATTCTTTGGTCGTACGGATGGACTATTTAGTGATGAAGGGGGCTTCGGCTTTAGTATGAGAAATGGTGGAAACCGTGGCATTGATATTCGGCATGACCTTCGTTTAAGCTTTGAAGAATCCGTTTTTGGAGGAAAGAGAGAAATTGAAATTTCTTGTTATGAGACATGTAATACTTGTGATGGTACAGGAGCTAAATCAAAGAATGGCATTAAAAAATGCACAAGTTGTGGTGGCAAAGGAGGAGAGAAGAAAACCCAGAGAACACCGTTTGGAATGATGTCTCAGGTTTCTACCTGCTCTAAGTGTGGTGGTCTTGGCATTATAATCACGGATAGATGTCGAAAGTGTGATGGCAGCGGTCTTGTGCAAGCTAAACGAAAAATGGAAGTGGTCATCCCTCCTGGCGTCAGTGATGGAGACACAATGAAAATTCGAGGAGAAGGGAATTTCGATAAGAGGAGGCGTTATACTGGGGATCTTTTTGTTGTCCTCCATGTCAATAGAAAGCAAGGAATTTGGAGAGAGGGTCTCAATTTATACTCAAAGATTAACATTGACTTCACCGAGGCAATACTGGGGTCTGTTAAAAAGGTAGAAACTGTTGAAGGTTTTAGAGACCTCCAAATTCCTTCTGGAATTCAACATGGACATTCAGTGAAGTTATCACGTATGGGAGTTCCAGATATGAATAAACCATCTATTCGGGGCGATCATTACTTCGTTGTAAATGTTCTTATTCCTAATGATATCAGAGGCACGGAACGTGCACTTGTTGAGCAGTTAGCTTCACTTCGAGCATCTAGACAAGGTCATTCATGGTCTTCTGATGACACTGGGCAGCGTAAAGGAAAATTCAATGATTCCATGTGGAGGGATAAAAAAGGTGATGCCTCAAGCGAGGGAGGTGAAACTGCAAGTTCTCTATGGGGATCAATCAAGAATTTCTTAAGGAGAGGAAATTCTGACGAAAGGTTTGCATCAATTAGCCAAGATACATCAACACTGATGTGGAGATTTGACCACCAAAACTATTCAGTCCCACATTACATTTTTGTTGTTCTATTTATAACTTGGATTTTGAAATCTATAGCAAAGTCTAAGCACTTGTTATTTCAGAAAAGAACCTAA | 1599 | 0.4146 | MSQILCSLFHIQTPLSMSFITPSPPSSSPFTIATPSNLTFKTTPPFPLSSTRNRSRFSTVVRAKGGKDHYSTLNVSNNASLQEIKSSYRKLARKYHPDMNKNPGAEEKFKEISAAYEVLSDDEKRSLYDRFGESGLQGENGGPASASEVDPSDLFDAFFGRTDGLFSDEGGFGFSMRNGGNRGIDIRHDLRLSFEESVFGGKREIEISCYETCNTCDGTGAKSKNGIKKCTSCGGKGGEKKTQRTPFGMMSQVSTCSKCGGLGIIITDRCRKCDGSGLVQAKRKMEVVIPPGVSDGDTMKIRGEGNFDKRRRYTGDLFVVLHVNRKQGIWREGLNLYSKINIDFTEAILGSVKKVETVEGFRDLQIPSGIQHGHSVKLSRMGVPDMNKPSIRGDHYFVVNVLIPNDIRGTERALVEQLASLRASRQGHSWSSDDTGQRKGKFNDSMWRDKKGDASSEGGETASSLWGSIKNFLRRGNSDERFASISQDTSTLMWRFDHQNYSVPHYIFVVLFITWILKSIAKSKHLLFQKRT | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo7g00904 | 532 | FunFam | Molecular chaperone DnaJ | 205 | 282 | - | - | |
| Mepo7g00904 | 532 | MobiDBLite | consensus disorder prediction | 432 | 456 | - | - | |
| Mepo7g00904 | 532 | PANTHER | DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED | 42 | 423 | - | - | |
| Mepo7g00904 | 532 | Gene3D | - | 183 | 319 | - | - | |
| Mepo7g00904 | 532 | CDD | DnaJ | 68 | 121 | IPR001623 | - | |
| Mepo7g00904 | 532 | ProSiteProfiles | Zinc finger CR-type profile. | 200 | 282 | IPR001305 | GO:0031072|GO:0051082 | |
| Mepo7g00904 | 532 | Pfam | DnaJ domain | 68 | 129 | IPR001623 | - | |
| Mepo7g00904 | 532 | MobiDBLite | consensus disorder prediction | 426 | 461 | - | - | |
| Mepo7g00904 | 532 | Hamap | Chaperone protein DnaJ [dnaJ]. | 65 | 472 | IPR012724 | GO:0005524|GO:0006457|GO:0009408|GO:0051082 | |
| Mepo7g00904 | 532 | SUPERFAMILY | DnaJ/Hsp40 cysteine-rich domain | 200 | 280 | IPR036410 | - | |
| Mepo7g00904 | 532 | SUPERFAMILY | Chaperone J-domain | 65 | 174 | IPR036869 | - | |
| Mepo7g00904 | 532 | CDD | DnaJ_zf | 213 | 277 | IPR001305 | GO:0031072|GO:0051082 | |
| Mepo7g00904 | 532 | ProSiteProfiles | dnaJ domain profile. | 68 | 132 | IPR001623 | - | |
| Mepo7g00904 | 532 | Gene3D | - | 327 | 434 | - | - | |
| Mepo7g00904 | 532 | Gene3D | DnaJ domain | 65 | 168 | IPR036869 | - | |
| Mepo7g00904 | 532 | FunFam | Chaperone protein dnaJ A6 chloroplastic | 65 | 171 | - | - | |
| Mepo7g00904 | 532 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 185 | 323 | IPR008971 | GO:0006457|GO:0051082 | |
| Mepo7g00904 | 532 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 331 | 414 | IPR008971 | GO:0006457|GO:0051082 | |
| Mepo7g00904 | 532 | PRINTS | DnaJ domain signature | 124 | 143 | IPR001623 | - | |
| Mepo7g00904 | 532 | PRINTS | DnaJ domain signature | 88 | 103 | IPR001623 | - | |
| Mepo7g00904 | 532 | PRINTS | DnaJ domain signature | 70 | 88 | IPR001623 | - | |
| Mepo7g00904 | 532 | PRINTS | DnaJ domain signature | 104 | 124 | IPR001623 | - | |
| Mepo7g00904 | 532 | ProSitePatterns | Nt-dnaJ domain signature. | 109 | 128 | IPR018253 | - | |
| Mepo7g00904 | 532 | Gene3D | - | 213 | 277 | - | - | |
| Mepo7g00904 | 532 | SMART | dnaj_3 | 67 | 124 | IPR001623 | - | |
| Mepo7g00904 | 532 | Pfam | DnaJ central domain | 213 | 277 | IPR001305 | GO:0031072|GO:0051082 | |
| Mepo7g00904 | 532 | CDD | DnaJ_C | 185 | 404 | - | - | |
| Mepo7g00904 | 532 | Pfam | DnaJ C terminal domain | 186 | 404 | IPR002939 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo7g00904 | Mepo-Chr7 | 14138661 | 14146626 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo7g00904 | 69 | 129 | C2H2 Transcription Factor Family | AT1G74250 | 46.269 | 2.77e-08 | 54.7 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo7g00904 | K03686 | - | gmx:100782135 | 725.702 |