Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00890 ATGAGCTTGCAACAAAGACGAGAAAGGAGGGAAGGGTCGAGGTTCCCTTCACAACGTCCTCCTCGCCAAGAATGGATTCCGAAAGGTGCTGGAGCATCCAGCTCCGCCTCCACCACATCCGCCGCCGCCGCCGCCGCTACCACCACAACCACAATTGTTGACCAACCTACAAGTTTGCACTCTCATGAGAAGAACACTAATAGTGATGGTGGTTCATCCAATCAAGGGGCTGTTGTTGCTCCAACATTTGCTAGGCATAGAAGTAATCACCATGTTTCTCATAGGGTGGAAAGGGAACATGTTGCGCATAGGACGGACAGGGATCATGTTGCTCACATGGTGGAGAGAGAACATGTTGCTCATCGCATGGAAAGGGAACATGTTGCTCATCGTCTGGAGAGGGAACATGTTGCTCATCGTGCAGAGAGGGAACATGTTGCTCATCGTGTGGAGAGGGAACATGTTGCTCATAGGGTGGAAAGGGGTAGAGGGAGGAGTGGGAATATGGCGGGGAGGCAATATGCATCGAGGGACTCTAGCTTGCCTCAATTAGTGCAGGAGATTCAGGAGAAGCTCACGAAAGGTACTGTGGAGTGCATGATTTGTTATGATATGGTTCGTAGGTCCGCACCTATCTGGTCTTGCTCCAGTTGCTACTCTATCTTTCACCTGAATTGCATCAAGAAGTGGGCTCGTGCGCCCACCTCAGTTGATTTATCAGCGGAGAAGAATCTAGGGTTTAACTGGCGGTGTCCTGGTTGTCAGTCTGTGCAACATACGTCTTCAAAGGATATTAAGTATGTTTGCTTTTGTGGGAAGAGGGTAGATCCTCCATCTGATTTGTATTTGACACCTCATTCGTGTGGCGAATCGTGCGGGAAGCCTCTTGAAAAGGAGGTGTTTGTTACTGAAGAGAGAAAGGATGAGCTTTGCCCTCATGCTTGTGTCTTGCAATGCCATCCGGGTCCGTGTCCTCCGTGTAAAGCATTTGCCCCTCCTCGTTTGTGCCCTTGTGGGAAGAAAAGAATTGCTACTCGCTGCTCTGATCGGCAGTCGGATCTTACCTGCGGTCAGCGCTGTGATAAGCTTCTTGATTGTGGACGTCATCGCTGTGAAAATGTATGCCATGTGGGTCCTTGTGATCCTTGTCAGGTGCTAATTGAGGCCTCTTGCTTTTGTAGTAAAATGACACAGGTGCTTTTTTGTGGGGAGATGGCTATGAAAGGTGAATTTGAAGCAGAAGGTGGAGTTTTTTCATGTGGTTCCAATTGTGGAAATGTGTTTGGCTGCGCTAATCATGTCTGCCGTGAGATTTGTCATCCGGGAAACTGCGGTGAATGTGAATTTTTACCAAGTCGGGTCAAGACATGCTGTTGTGGGAAAACAAAGTTGGAGGATGAACGCAAGAGTTGTGCGGATCCGATACCTACCTGCTCAAAAGTATGCAGCAAGACCCTTCTTTGTGGGGTACATGCTTGTAAGGAGACATGCCATGTCGGGGAATGCCCACCATGTAAGGTCCTAATTTCACAGAAATGTCGTTGTGGCTCAACTTCCAGAACTGTGGAATGCTATAAAACAACAACTGAGAATCAGAAATTTACTTGTCAAAAGCCGTGTGGGGCAAAGAAGAATTGTGGAAGGCACCGATGTAGTGAAAAGTGTTGTCCATTGTCTGGTCCAAATAATGGTTTGACTAGTCCGGATTGGGATCCTCACTTTTGTTCCATGCTGTGTGGGAAGAAGCTGAGATGTGGCCAGCATGTGTGTGAAACGTTGTGTCACAGTGGTCATTGCCCACCTTGTCTTGAAACGATCTTCACTGATTTAGCATGTGCTTGTGGTATGACTTCAATTCCTCCTCCCCTACCTTGCGGTACAATGCCTCCCTTGTGTCAGCTTCCATGTTCAGTTCCTCAGCCGTGTGGCCATTCAGGCTCTCATAGCTGCCATTTTGGAGACTGCCCTCCTTGTTCGGTGCCTGTGTCAAAAGAATGTGTCGGTGGCCATGTCATTCTTAGGAACATACCTTGTGGCTCAAATAATATTAAATGCAATAATCCCTGTGGAAGGACTAGACAATGTGGTTTACATGCATGTGGAAGATCATGTCACTCCCCACCTTGTGATACTCTACCTGGTTTTGTGAAAGGTTTACGAGCGCCATGTGGACAGACATGTGGTGCTCCAAGGAGTGGCTGCCGGCATATGTGTATGGCTCTCTGTCACCCTGGATGTCCTTGTCCCGATGTAAGATGTGAATTCCCCGTTACAATTACTTGTTCTTGTGGCCGCATATCAGCGAATGTTCCTTGTGATGTTGGTGGTAATAATAGTAATTATAATGCTGATGCGATATTTGAAGCTTCGATCATTCAAAAATTGCCCATGCCACTTCAACCAGTCGATGCAAATGGCCAAAAAGTTCCTCTTGGACAAAGAAAGCTGATGTGTGACGAGGAATGTGCTAAGTTGGAGCGTAAAAGGGTTCTTGCTGATGCCTTTGACATCACTCCAAGTCTTGATGCTCTCCATTTTGGTGAGAATTCTTCTTTTGAGTTGCTTTCTGACACGTTTAGACGTGATCCAAAGTGGGTTTTGGCTATTGAGGAGAGATGCAAAATATTAGTACTTGGGAAAAGCAAAGGAACTACACATGGTTCGAAAGTCCATGTCTTTTGTCCTATGATAAAGGATAAAAGAGATGCAGTGAGAATGATTGCTGAGAGATGGAAGCTTGCAGTGAACGCTGCTGGCTGGGAGCCAAAGAGATTCATCGTAATTTCTGCCACTCAAAAATCTAAGACCCCAGCTCGTGTGCTTGGTGTTAAGGGTACCACAACTCTAAATGCGCCACTTCCTACTGCATTTGATCCCTTGGTTGACATGGACCCGAGGCTTGTTGTCTCGTTTCCAGACTTGCCAAGGGACGCTGATATTAGTGCCTTGGTTTTGAGATTCGGTGGTGAATGTGAGCTTGTTTGGTTGAACGACAGGAATGCTTTGGCTGTCTTTCACGATCCTGCCCGAGCTGCAACTGCGATGAGGAGGTTGGATCACGGAACAGTTTATCAGGGTGCTGTTTCGTTTGTCCAGAATGCTGGAGCATCTGCTGCGTCTTCGGTTACCAGTGCTTGGGGAGGAACGAAAGAGGGAGGAGGACTGTCAACACTGAGAAGCAATCCATGGAAAAAGGCAGCGGTTCTCGACCCAGGTTGGAAAGAAGATTCTTGGGGCGATGAACAATGGACTACTACCAGTGATTCTGCGAATATCCAACCATCAGTTCTGAAGAAAGAAGCGCCAATACCTGCTTCGTTGAATCCTTGGAATGTTTTGAATCATGAATCGAGTTCGAGTTCATCATCGGCAACTGTCATAAGAAGTGTAGCTTCTGGAAAACAAACTGAAAGAGGCGATGTCTCAACTAAGGTGGAGCCTTCTGCAGGTGGCGCAAATGAAGGAAACTCAGATGCAACAGAAGCTGCTGAAGTTGTAGATGATTGGGAGAAGGCTTTTGAATGA 3525 0.4718 MSLQQRRERREGSRFPSQRPPRQEWIPKGAGASSSASTTSAAAAAATTTTTIVDQPTSLHSHEKNTNSDGGSSNQGAVVAPTFARHRSNHHVSHRVEREHVAHRTDRDHVAHMVEREHVAHRMEREHVAHRLEREHVAHRAEREHVAHRVEREHVAHRVERGRGRSGNMAGRQYASRDSSLPQLVQEIQEKLTKGTVECMICYDMVRRSAPIWSCSSCYSIFHLNCIKKWARAPTSVDLSAEKNLGFNWRCPGCQSVQHTSSKDIKYVCFCGKRVDPPSDLYLTPHSCGESCGKPLEKEVFVTEERKDELCPHACVLQCHPGPCPPCKAFAPPRLCPCGKKRIATRCSDRQSDLTCGQRCDKLLDCGRHRCENVCHVGPCDPCQVLIEASCFCSKMTQVLFCGEMAMKGEFEAEGGVFSCGSNCGNVFGCANHVCREICHPGNCGECEFLPSRVKTCCCGKTKLEDERKSCADPIPTCSKVCSKTLLCGVHACKETCHVGECPPCKVLISQKCRCGSTSRTVECYKTTTENQKFTCQKPCGAKKNCGRHRCSEKCCPLSGPNNGLTSPDWDPHFCSMLCGKKLRCGQHVCETLCHSGHCPPCLETIFTDLACACGMTSIPPPLPCGTMPPLCQLPCSVPQPCGHSGSHSCHFGDCPPCSVPVSKECVGGHVILRNIPCGSNNIKCNNPCGRTRQCGLHACGRSCHSPPCDTLPGFVKGLRAPCGQTCGAPRSGCRHMCMALCHPGCPCPDVRCEFPVTITCSCGRISANVPCDVGGNNSNYNADAIFEASIIQKLPMPLQPVDANGQKVPLGQRKLMCDEECAKLERKRVLADAFDITPSLDALHFGENSSFELLSDTFRRDPKWVLAIEERCKILVLGKSKGTTHGSKVHVFCPMIKDKRDAVRMIAERWKLAVNAAGWEPKRFIVISATQKSKTPARVLGVKGTTTLNAPLPTAFDPLVDMDPRLVVSFPDLPRDADISALVLRFGGECELVWLNDRNALAVFHDPARAATAMRRLDHGTVYQGAVSFVQNAGASAASSVTSAWGGTKEGGGLSTLRSNPWKKAAVLDPGWKEDSWGDEQWTTTSDSANIQPSVLKKEAPIPASLNPWNVLNHESSSSSSSATVIRSVASGKQTERGDVSTKVEPSAGGANEGNSDATEAAEVVDDWEKAFE 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00890 1174 CDD NF-X1-zinc-finger 356 404 - -
Mepo7g00890 1174 MobiDBLite consensus disorder prediction 1114 1174 - -
Mepo7g00890 1174 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 77 1081 IPR034078 GO:0003700
Mepo7g00890 1174 SMART znfxneu3 366 385 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 SMART znfxneu3 430 449 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 SMART znfxneu3 734 755 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 SMART znfxneu3 311 329 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 SMART znfxneu3 695 725 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 SMART znfxneu3 546 577 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 SMART znfxneu3 585 604 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 SMART znfxneu3 642 660 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 SMART znfxneu3 488 507 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 MobiDBLite consensus disorder prediction 1 17 - -
Mepo7g00890 1174 CDD RING-CH-C4HC3_NFX1-like 198 255 - -
Mepo7g00890 1174 Pfam NF-X1 type zinc finger 366 384 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 Pfam NF-X1 type zinc finger 585 602 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 Pfam NF-X1 type zinc finger 695 710 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 Pfam NF-X1 type zinc finger 430 447 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 Pfam NF-X1 type zinc finger 488 506 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 Pfam NF-X1 type zinc finger 313 328 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 Pfam NF-X1 type zinc finger 546 557 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 Pfam NF-X1 type zinc finger 642 659 IPR000967 GO:0005634|GO:0008270
Mepo7g00890 1174 SUPERFAMILY RING/U-box 189 259 - -
Mepo7g00890 1174 CDD NF-X1-zinc-finger 478 526 - -
Mepo7g00890 1174 CDD NF-X1-zinc-finger 723 772 - -
Mepo7g00890 1174 MobiDBLite consensus disorder prediction 1071 1094 - -
Mepo7g00890 1174 ProSiteProfiles Zinc finger RING-type profile. 199 255 IPR001841 -
Mepo7g00890 1174 MobiDBLite consensus disorder prediction 86 105 - -
Mepo7g00890 1174 ProSiteProfiles Zinc finger PHD-type profile. 196 257 IPR019787 -
Mepo7g00890 1174 MobiDBLite consensus disorder prediction 1114 1138 - -
Mepo7g00890 1174 MobiDBLite consensus disorder prediction 1079 1094 - -
Mepo7g00890 1174 MobiDBLite consensus disorder prediction 30 77 - -
Mepo7g00890 1174 MobiDBLite consensus disorder prediction 1 77 - -
Mepo7g00890 1174 CDD NF-X1-zinc-finger 575 627 - -
Mepo7g00890 1174 CDD NF-X1-zinc-finger 420 465 - -
Mepo7g00890 1174 CDD NF-X1-zinc-finger 632 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00890 Mepo-Chr7 13913067 13918238 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Mepo7g00890 zf-NF-X1 0.61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00890 K12236 - gmx:100819219 1649.41