Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00850 ATGGCTATTAAATCACCTTCTTCTTCCTCTTCCTCCCTCTCTAATGATTTCAGCTATGACGTGTTCCTTAGTTTCAGGGGTACTGATACTCGATACGGTTTCACCGGTAATCTCTTGAAGGCTCTTTTTGGCAAAGGAATCCACACCTTCATTGATAATAAGGAGCTTAAGAGAGGTTACGAAATCACACCATCGATCTGCAAGTGTATTGAAGACTCAAGGATTGCCATTATAGTCTTCTCTAAGGACTATGCTTCTTCTTCATTTTGTTTAGACGAACTTGTCCACATCATTCACTACTTCAAGGAAAACGGTCGCCTTGTTCTGCCAGTGTTCTATGATGTGGACCCTTCTCACGTCCGACATAAGAATTATAGTTATGGTGAAGCACTTGCTAAGCATGAAGAGAGGTTCCAAAATAACAAGAAAAACATTGAGCGGTTGCTGAAATGGAAGAAAGCTCTTAACCAAGCTGCTGACTTAGCCGGCTACCATTTCAATATTGGAAAGGAATATGAATGCGATTTTATTGAAAAAATAGTTACAGACATCTCCTACAAGATCAACCATGTTCCTTTACATGTTGCTGAGTACCTTGTTGGACTCGAATCTCGAATATCAGAAGTGAATTCACTTCTAGACTTGGGATCTAATGATGGAGTCTGCATAATAGGAATCCTCGGAACTGGTGGAATGGGTAAGACAACTCTTGCTCAAGCAGTTTATAATTCAATTGCTAAACAATTTGAATGTAAGTGTTTCCTTCATAATGTGAGAGAAAATTCAGATAAACATGGCCTAGAGTATCTCCAAGAGAAGCTCCTCTCAAAATCAATCGAATCTGAAAACCAATTTGGACATGTTAATGAAGGAATACCAATCATAAGACGAAGGCTATGTCAGAAGAAAGTTCTGCTGATTCTTGATGACGTTGACAAACTAAAGCAATTGCAGGTTTTGATCGGAGAGCCTAGTTCGCTCGGTCATGGCAGTAGAGTCATCATTACCACTCGAGATAAACATTTGTTATCATCTCACGGGATTAAAAAAATATACGAAGCAGATGGTTTAAATGAGGAGCAAGCTCTTGAATTGTTAAGAACGAAGGCTTTTAAAAGTAACAAAAATGATTCAAGGTATGATTATATTTTAAACCGTGCAATTAAATATGCTTCTGGCCTTCCACTAGCTTTGGAAGTAGTGGGTTCCAACTTGTTTGGAAAGAGTATAGAAAAATGTGAGTCTACATTAGATAAGTATGAAAGAATTCCACATGAAGATATCCAAAAAATACTTAAAGTAAGCTTTGACACTTTGGACGAAGAACAACGGATTGTCTTTTTGGATATTGCTTGTTTCTTCAATGGGTGTAGAAGGGAAGAAGTCGATGAGATACTTCATGGTCATTATGGTCATTGCATAAAAAGCCATCTCAGAGTGTTGGTTGATAAATCTCTCATAAAGATTAGTTATCTGGATGAAGTGACTTTACATGACTTGATAGAGGACATGGGTAAAGAAATCGTCCGACAAGAATCACCTAATGAGCCTTGA 1554 0.3803 MAIKSPSSSSSSLSNDFSYDVFLSFRGTDTRYGFTGNLLKALFGKGIHTFIDNKELKRGYEITPSICKCIEDSRIAIIVFSKDYASSSFCLDELVHIIHYFKENGRLVLPVFYDVDPSHVRHKNYSYGEALAKHEERFQNNKKNIERLLKWKKALNQAADLAGYHFNIGKEYECDFIEKIVTDISYKINHVPLHVAEYLVGLESRISEVNSLLDLGSNDGVCIIGILGTGGMGKTTLAQAVYNSIAKQFECKCFLHNVRENSDKHGLEYLQEKLLSKSIESENQFGHVNEGIPIIRRRLCQKKVLLILDDVDKLKQLQVLIGEPSSLGHGSRVIITTRDKHLLSSHGIKKIYEADGLNEEQALELLRTKAFKSNKNDSRYDYILNRAIKYASGLPLALEVVGSNLFGKSIEKCESTLDKYERIPHEDIQKILKVSFDTLDEEQRIVFLDIACFFNGCRREEVDEILHGHYGHCIKSHLRVLVDKSLIKISYLDEVTLHDLIEDMGKEIVRQESPNEP 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00850 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 450 IPR027417 -
Mepo7g00850 517 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 190 - -
Mepo7g00850 517 SMART till_3 18 161 IPR000157 GO:0007165
Mepo7g00850 517 Pfam NB-ARC domain 206 434 IPR002182 GO:0043531
Mepo7g00850 517 SUPERFAMILY "Winged helix" DNA-binding domain 427 513 IPR036390 -
Mepo7g00850 517 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 517 IPR044974 GO:0006952
Mepo7g00850 517 Gene3D - 189 352 IPR027417 -
Mepo7g00850 517 Gene3D - 17 188 IPR035897 -
Mepo7g00850 517 Gene3D - 356 440 IPR042197 -
Mepo7g00850 517 ProSiteProfiles TIR domain profile. 17 188 IPR000157 GO:0007165
Mepo7g00850 517 SMART AAA_5 220 357 IPR003593 GO:0016887
Mepo7g00850 517 Pfam TIR domain 19 190 IPR000157 GO:0007165
Mepo7g00850 517 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 164 IPR035897 -
Mepo7g00850 517 PRINTS Disease resistance protein signature 223 238 - -
Mepo7g00850 517 PRINTS Disease resistance protein signature 391 405 - -
Mepo7g00850 517 PRINTS Disease resistance protein signature 298 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00850 Mepo-Chr7 13435548 13437325 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00850 13 517 WRKY Transcription Factor Family AT4G12020 28.407 5.04e-46 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00850 - - mtr:11408974 828.935