Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00834 ATGGAAGGAGGAGGAATGTTATCATCTTCATCATCACATTCACAAAACTATATCTACAGAGAGTGTTTAAGAAACCATGCAGCAAGCCTTGGAAGCTACGCCACCGACGGCTGCGGTGAATTCACCATCGACGACTCATCACCGTCCGCGGTAAACAGCCTCCAATGTGCAGCCTGCGGCTGTCACCGGAACTTCCACCGCAAAATAACCGCGATCACAAGGGAGAGCGCCGCGGCTGCTGCAATGTCGGATCAGCTGATGGAATATTCCGGGGGAGGAGGTAGTGGAGGAGATGGGAGGAGGAAGAGGTACCGGACGAAATTTACGCCGGATCAGAAGGAGAAGATGATGGGATTTGCTGAGAAGTTAGGGTGGAAATTGCAAAGAAAAGAACTTGATGAAGAGATTGAAAGGTTTTGTGAAAGTGTTGGTGTGAGTAGACAAGTTTTTAAGGTTTGGATGCATAATCATAAGAATTCTTGTTTCTCAAATTCTTCTGATCCTTCTACTGGTAATGCTAATTCCTCTCTTACTCAGTAG 540 0.4667 MEGGGMLSSSSSHSQNYIYRECLRNHAASLGSYATDGCGEFTIDDSSPSAVNSLQCAACGCHRNFHRKITAITRESAAAAAMSDQLMEYSGGGGSGGDGRRKRYRTKFTPDQKEKMMGFAEKLGWKLQRKELDEEIERFCESVGVSRQVFKVWMHNHKNSCFSNSSDPSTGNANSSLTQ 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00834 179 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 19 68 IPR006456 -
Mepo7g00834 179 Pfam ZF-HD protein dimerisation region 17 69 IPR006456 -
Mepo7g00834 179 FunFam Zinc-finger homeodomain protein 2 92 163 - -
Mepo7g00834 179 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 19 69 IPR006456 -
Mepo7g00834 179 SUPERFAMILY Homeodomain-like 88 159 IPR009057 -
Mepo7g00834 179 Gene3D - 87 165 - -
Mepo7g00834 179 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 159 - -
Mepo7g00834 179 NCBIfam homeobox domain, ZF-HD class 101 159 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00834 Mepo-Chr7 13259083 13259990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00834 19 158 ZF-HD Transcription Factor Family AT1G14440 40.741 4.12e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mepo7g00834 ZF-HD_dimer 1.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00834 - - cmo:103504587 230.72