Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00831 ATGTTAGCTAATAGCTTATCTCCATCTTCACTTCCATCTTCTGAGCCTTTTTCTTGCAATGAAAATGGCACTTCTTCCACTAATAAAAGGAAAAGAAGACCGGCCGGAACACCAGATCCAGATGCAGAAGTGGTGTCTCTCTCACCAAAAACATTGTTGGAATCAGATCGTTATGTATGTGAGATCTGCAACCAAGGATTCCAAAGGGACCAAAATTTACAGATGCATAGAAGAAGGCATAAGGTACCATGGAAGCTATTGAAGAGAGAAACACCAGTTGTTAGAAAAAGAGTTTTTGTTTGTCCTGAACCAACTTGTTTGCACCATGATCCTTGTCATGCTTTAGGTGATCTTGTTGGTATCAAAAAACATTTTAGAAGGAAACATAGTAATCATAAACAATGGGTTTGTGAAAGATGTTCTAAAGGTTATGCAGTGCAATCTGATTATAAAGCTCATCTCAAAACTTGTGGTACTAGAGGTCATTCATGTGATTGTGGTCGTGTTTTCTCAAGGGTTGAGAGCTTTATTGAGCATCAAGATGCTTGCAACATGGGAAGGATCCATAATTCAGAATCTCAACCACTACAAACACCAACTGCATGCTTATCAAGAACAGCTTCAAGTCCAAGTCCATCAAGTGAAACAAATTTCAATACATGTCCATGGCAAACAAGGCTTCAAGCAATGCCAAAAACAATAAAAGAATCAACAATATTCATGAACCCTATTACTCCTATTACTACTATTACACCTTCTTCTCAAACTTTCTCCAAGAACAATAAACTTCTACTCGATCCAAACTTGGAACTTCAACTCTTCACTACAAACAACACCAACACGTCTCTGACAAGAGACACGCCTTCGATTAGAAGTGTTGGTACTGTAGAAGCTATTCAGAAGGTTAACCGGTCAACTCAGTTGCATCTCTCAATAGGGTCCTCAGAAATGAGTCATGAGAAAAATGAATCAAACAATATTGGAAACTCAAACTCATCACCAAAAGAGAGTAGCAATAGCAATGAGAAAGTTCAGTCAACAACAACAAACAACATGGGTTTGTTGAGGGTTCAAGAACAAGCAAAGGAACAATTAAGGGTAGCTATGGCTGAAAAAGCTTATGCTGAAGAAGCAAGGAAACAAGCAAAGAAACAAATTGAAATGGCTGAACAAGAGTTCAACAATGCAAAGAGAATTAGACAACAAGCACAAAGTGAACTTGATAAAGCTTATGGATTGAAACAACATGCAATAAAGCAAATCAATTCAACTATGCTTCAAATCACTTGTCAAGCTTGCAAACAACAATTTCAACATGAAGATAACTCTTTGGTGTTGAGCTATGTTTCTTCTGCCATAACTACTGAAGGTGGTGAAGTAGAAAATGTTGATGGAAAAGGCAAAACAACTAATTAG 1416 0.375 MLANSLSPSSLPSSEPFSCNENGTSSTNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGRIHNSESQPLQTPTACLSRTASSPSPSSETNFNTCPWQTRLQAMPKTIKESTIFMNPITPITTITPSSQTFSKNNKLLLDPNLELQLFTTNNTNTSLTRDTPSIRSVGTVEAIQKVNRSTQLHLSIGSSEMSHEKNESNNIGNSNSSPKESSNSNEKVQSTTTNNMGLLRVQEQAKEQLRVAMAEKAYAEEARKQAKKQIEMAEQEFNNAKRIRQQAQSELDKAYGLKQHAIKQINSTMLQITCQACKQQFQHEDNSLVLSYVSSAITTEGGEVENVDGKGKTTN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00831 471 Coils Coil 358 406 - -
Mepo7g00831 471 Gene3D Classic Zinc Finger 36 98 - -
Mepo7g00831 471 SMART c2h2final6 135 162 IPR013087 -
Mepo7g00831 471 SMART c2h2final6 58 80 IPR013087 -
Mepo7g00831 471 SMART c2h2final6 99 129 IPR013087 -
Mepo7g00831 471 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Mepo7g00831 471 MobiDBLite consensus disorder prediction 1 45 - -
Mepo7g00831 471 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 16 379 IPR031140 -
Mepo7g00831 471 MobiDBLite consensus disorder prediction 313 352 - -
Mepo7g00831 471 MobiDBLite consensus disorder prediction 1 25 - -
Mepo7g00831 471 Pfam Zinc finger, C2H2 type 58 80 IPR013087 -
Mepo7g00831 471 SUPERFAMILY beta-beta-alpha zinc fingers 55 81 IPR036236 -
Mepo7g00831 471 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 80 IPR013087 -
Mepo7g00831 471 FunFam protein indeterminate-domain 12-like 37 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00831 Mepo-Chr7 13201848 13205377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00831 21 218 C2H2 Transcription Factor Family AT2G01940 79.904 7.99e-118 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo7g00831 zf-C2H2 0.0045 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00831 K25871 - gmx:100785333 646.736