LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo7g00801	ATGGCAGAAACAAATTCAGTTGACGTGATTTTGGACTTTTTGAAGAGAAACCGGTTCACACGAGCTGAGGCAGCTTTGCGAAGTGAGCTCAATAACTGTTCTGATGTGAATGGGATCCTTCAGAAGCTTACCTTGGATGAAAAGAACTTGTGTGATTTGTCGCAGAATGATAAGGGGAAGCTAGTGGTAGAAAATCGAGGGTTGGATTCTCGTGATAGTGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATCGAGTGTGGAACTGGTAGAAATACTACTGAGAGCAAATGGAAAAATGCCACTCTGGCTGAGGAAAGGAATAAATCTAATGAAGTGGTTGGAACGAGTGGCACGAATTTCACTTTCTCGAAGAGTTCAGAGGACAGTGTATTCGATTTGCACTCATGGAAGATTAATGGTCCTGCAGAGCCATACCAAAATGATGGTGGAAGCAAGGCTAGTAATACTTCGAAGGCCACAATATCTCAGCAATCAAAAACTCAAATGAGCGAAGCCTCAATATCTCAGCAATCGAAAACTCAAATGAGTGAAGCCGCAATATCTCAGCAATCGAAAACTCAAATGAGTGAAACCTTTGACGCAGCCAACAGTAATGTAAAAACTACGGAGGAAAATAATGTTCCCGATGAGAAAAAACCCTTGTGGCTTGGAAGTAGTGGTAAAGCCTCTACAGAACCAAAGATTAACCTTGTGCAAAACAAAGAATCTAGGGAAATTGATCGGCAGCAGCTTAAATTTAGTAGTTCGTCACTTAAAGAGAATTTGGCTGATAACGTCTTGTCAAGAGCTGATGAGAATGCAAATTCATCTTCTGATGTTTGGAAAGATTGTTCCATCAAGACTGTTTTCCCTTTTTCAAAGGGGGATGTGTCTACGAGCTATAGTAGCTCAACTTATTCAGAAAAAGTAGACGAAAAGAGAAAGCCAGAAATTGGTGATGCAAGGGCTTATATAAAAGAGCAGGTGGATGAAGTGGGGAGAGCTTTTTACTTGGGGAAGTTGCAAGGAAGTTCTGAACAGAATAACATCGGGGGATTAAGTTTTCCTCTTGCATTGGAGAAGCAGAAGGAAGAGTATCCAAGGCTTCCTCCTGTGAAAATTAAGTCAGAAGATAAGCCGTTGACTATTAATTGGAGCGAGAAGTTTGAATCCGATGGATTGGCTGCTAAGCTGGCAAGTGCTGACAGCTCTTTACTTATTGGATCATATCTGGATGTACCTATTGGACAAGAAATTAAAAATGCAGGTATGAGGAAGGCTACAGGGGGCAGTTGGCTGTCCGTTAGTCAAGGAATATCTGAGGATACCTCTGATCTTGTATCAGGTTTTGCTACAGTTGGTGATGGGTTGAGTGAATCTGTTGATTATCCAAATGAATATTGGGACTCTGATGAATATGACGACGACGACGATGTTGGGTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCGCACGAAATCGATTACCCTAGTGACAATGAAAAGGGAACTGGGCATGGAAGCGTTCCAGATCCTCAGGAAAGAGGTCCTGTCAAAGAGGAGGATGACGACCAATCTTTCGCTGAAGAGGATTCTTATTTCTCTGGAGAGCAATATCTTCAAGCAAAGAATGTTGAGCCGGTCATAGGGTCAGATGATCCTATTGGTATAACGGTTACTAATATGTATGGAAGGGCTAATGGTAATGATTTAATGGCTCAATACGATGGAGAATTGATGGATGTAGAGGAACTGAATCTGATGCACGCGGAACCTGTCTGGCAGGGCTTTGTCCCTCAGACAAATGACCTGATCATGTTGGGAGATGGAAAAGTTCTGAATCATAGTGGAAGATCACGACTCGAGGAAATGGAAGATGATCAACACGGTTCAGTTAGGTCAATCGGGGTAGGTTTCAACAGTGATGCTGCCGATATCGGCAGTGAAGTGCATGGAAGTTTTATTGGTGGTAGCAGTGAAGGGGATTTAGAATATTTCCGTGACCGTGATAGTGGACTTGGGGGATCTAAACACTCTCATCATGATTTCGGAAAGAATTCTATGGACAAATCATTTAAAAATAAGAAGAAAAATGACGAGATTGAATCGAATAAATATGTCATTGGAGGTCATAAAGATGCACACTCACAAATAAAAACACATACTGAAGGCAACTTTTCATTTCCTCAATCTCTTAAAGATAGCCAGATGATTCAGGGTGGTGGTTCCAGTAAGTCGCCATGGTTAAATAATTGTAATGCGGATGAAACCGACGACTGTATGAATGCTTTTGAGGGATCTGATGAAATGCTTTCTTCGTGGAGGCAGAAGAGTAGTGATTCTTCACCCGAGAAAAGTTCTAGGGATGAGAATAATGCTCATGCGGTTAGATCTTCGAACTCTTCTCCAACCACTGTTGATAATTACGGGTACGCTGATAAAGAGCATGTCAAGCTAGAAAAGGATGATGAAGAAGTTGACATTACAAGGGAAGATGATTTAGGTGTTTCACAAGAGGATGAAGAGATTGCTGCTGTGCAAGAACAGGTAAGGCAAATAAAGGCTCAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGTCGCTATCATGTCACCGAGTATCTGGGATCTGCTGCATTTAGTAAAGCTATACAAGCTCATGACCTGCACACAGGCGTGGATGTTTGTATTAAAATTATAAAGAACAACAAGGATTTCTTTGATCAAAGCCTTGATGAGATCAAACTCCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACATTTTGCGGTTATATGATTATTTCTATTATAGAGAACATTTGTTAATAGTATGTGAGCTACTCAAAGCCAACTTATACGAGTTTCATAAATTCAACAGAGAATCAGGAGGGGAAGTGTACTTCACAATGCCAAGGTTGCAGTCAATTACCATTCAATGTTTGGAAGCACTTCAGTATTTACATAACCTTGGACTAATACATTGTGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTACAGCCGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCATATGTTCAGTCCAGGTCCTATCGTGCTCCTGAGGTTATTCTTGGGCTTTCATATGACAAGAAGATTGATATCTGGTCCCTTGGATGCATCTTGGCAGAACTTTGTACTGGCAATGTCTTATTTCAAAATGATTCCCCGGCAACATTACTTGCTAGGGTAATCGGGATCATCGGTCCAATTGGTCAAAGTATGCTAGCAAAAGGACGGGATACTTATAAGTACTTCACAAAAAATCATATGCTTTATGAGAGGAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCAAAGAAGACATCTTTGAGGCATAGATTACCGATGGGGGACCAAGGCTTCATTGACTTCGTTGCTCATTTGCTCGAGGTTAACCCGAAGAAGCGACCTTCTGCATCTGAAGCTCTAAAGCACCCCTGGTTATCATACCCTTACGAACCGATATCATCTTGA	3630	0.4118	MAETNSVDVILDFLKRNRFTRAEAALRSELNNCSDVNGILQKLTLDEKNLCDLSQNDKGKLVVENRGLDSRDSVEVSKELIVKEIECGTGRNTTESKWKNATLAEERNKSNEVVGTSGTNFTFSKSSEDSVFDLHSWKINGPAEPYQNDGGSKASNTSKATISQQSKTQMSEASISQQSKTQMSEAAISQQSKTQMSETFDAANSNVKTTEENNVPDEKKPLWLGSSGKASTEPKINLVQNKESREIDRQQLKFSSSSLKENLADNVLSRADENANSSSDVWKDCSIKTVFPFSKGDVSTSYSSSTYSEKVDEKRKPEIGDARAYIKEQVDEVGRAFYLGKLQGSSEQNNIGGLSFPLALEKQKEEYPRLPPVKIKSEDKPLTINWSEKFESDGLAAKLASADSSLLIGSYLDVPIGQEIKNAGMRKATGGSWLSVSQGISEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPVKEEDDDQSFAEEDSYFSGEQYLQAKNVEPVIGSDDPIGITVTNMYGRANGNDLMAQYDGELMDVEELNLMHAEPVWQGFVPQTNDLIMLGDGKVLNHSGRSRLEEMEDDQHGSVRSIGVGFNSDAADIGSEVHGSFIGGSSEGDLEYFRDRDSGLGGSKHSHHDFGKNSMDKSFKNKKKNDEIESNKYVIGGHKDAHSQIKTHTEGNFSFPQSLKDSQMIQGGGSSKSPWLNNCNADETDDCMNAFEGSDEMLSSWRQKSSDSSPEKSSRDENNAHAVRSSNSSPTTVDNYGYADKEHVKLEKDDEEVDITREDDLGVSQEDEEIAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGVDVCIKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQYLHNLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIGQSMLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS	1209

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo7g00801	1209	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	432	1200	-	-
	Mepo7g00801	1209	MobiDBLite	consensus disorder prediction	773	825	-	-
	Mepo7g00801	1209	ProSiteProfiles	Protein kinase domain profile.	898	1200	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo7g00801	1209	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	1024	1036	IPR008271	GO:0004672\|GO:0006468
	Mepo7g00801	1209	Coils	Coil	840	870	-	-
	Mepo7g00801	1209	MobiDBLite	consensus disorder prediction	797	812	-	-
	Mepo7g00801	1209	MobiDBLite	consensus disorder prediction	149	211	-	-
	Mepo7g00801	1209	MobiDBLite	consensus disorder prediction	503	533	-	-
	Mepo7g00801	1209	SMART	serkin_6	898	1200	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo7g00801	1209	Pfam	Protein kinase domain	898	1200	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo7g00801	1209	CDD	PKc_DYRK_like	898	1200	-	-
	Mepo7g00801	1209	MobiDBLite	consensus disorder prediction	728	754	-	-
	Mepo7g00801	1209	FunFam	Serine/threonine-protein kinase ppk15	977	1201	-	-
	Mepo7g00801	1209	MobiDBLite	consensus disorder prediction	142	231	-	-
	Mepo7g00801	1209	Gene3D	Phosphorylase Kinase; domain 1	892	979	-	-
	Mepo7g00801	1209	FunFam	Putative serine/threonine-protein kinase dyrk2	892	979	-	-
	Mepo7g00801	1209	Gene3D	Transferase(Phosphotransferase) domain 1	952	1200	-	-
	Mepo7g00801	1209	MobiDBLite	consensus disorder prediction	676	702	-	-
	Mepo7g00801	1209	SUPERFAMILY	Protein kinase-like (PK-like)	887	1202	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo7g00801	Mepo-Chr7	12633037	12641576	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo7g00801	897	1195	MAP Kinase Gene Family	AT5G19010	31.975	9.68e-31	127

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-PRP4	Mepo7g00801		Pkinase	1.3e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo7g00801	-		-	mtr:25496682	2354.33