Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00798 ATGTGTAGTAGAGGCCATTGGAGACCATCCGAGGATGAGAAGCTTAGGGAGTTGGTGGAAAGTTATGGACCTCATAATTGGAACGCCATAGCTGAAAATCTCCGAGGAAGATCAGGGAAAAGTTGTAGGTTGAGATGGTTCAATCAATTGGACCCAAGAATAAACAGAAATCCTTTCACAGAGGAAGAAGAAGAGCGTCTTATAACTTCTCATCGGATTCATGGTAATAGATGGGCGGTAATTGCAAGACACTTCCCCGGACGGACTGATAACGCCGTAAAGAATCATTGGCATGTGATGATGGCGAGGATTCGTCGAGAAAGGTATAAGATCTATGCAAAAGGTCCTCTTGATCATCACACAATTTTCTCTTCAAATGATCATCAAACAAACTTTGAAAGAACAAATCTTCACTCTTTTGTTGAGAAGTATCATGAAAAGCATAATCACCCTCGTGTCTCTCATAGCTCTTTCCAATTTCCCAAGTTTCACTTTCATGGTCCAAATTCCTGTTCCACAGTGCTTCAAGATAAAAGTCAATCGATTGAGTTCTATGATTTTCTTCAAGTAGATTCCAATAAAAGTGAAGTAACGGATAATGCTAGAAGAGATGATGAGGAAGTCAATCAAGATGTTATGGAACTGAAGAACAAGGAAAACAATGTTCAATTCATTGATTTTTTGTCTACCGGAAGTTGCAAACATAGTTGCAAAATTAAGTGA 723 0.39 MCSRGHWRPSEDEKLRELVESYGPHNWNAIAENLRGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLITSHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERYKIYAKGPLDHHTIFSSNDHQTNFERTNLHSFVEKYHEKHNHPRVSHSSFQFPKFHFHGPNSCSTVLQDKSQSIEFYDFLQVDSNKSEVTDNARRDDEEVNQDVMELKNKENNVQFIDFLSTGSCKHSCKIK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00798 240 Gene3D - 57 150 - -
Mepo7g00798 240 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Mepo7g00798 240 Coils Coil 198 218 - -
Mepo7g00798 240 FunFam MYB transcription factor 4 55 - -
Mepo7g00798 240 SMART sant 3 52 IPR001005 -
Mepo7g00798 240 SMART sant 55 103 IPR001005 -
Mepo7g00798 240 Pfam Myb-like DNA-binding domain 56 99 IPR001005 -
Mepo7g00798 240 Pfam Myb-like DNA-binding domain 4 50 IPR001005 -
Mepo7g00798 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Mepo7g00798 240 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Mepo7g00798 240 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Mepo7g00798 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Mepo7g00798 240 PANTHER MYB PROTEIN-RELATED 4 171 - -
Mepo7g00798 240 CDD SANT 58 101 IPR001005 -
Mepo7g00798 240 CDD SANT 7 48 IPR001005 -
Mepo7g00798 240 Gene3D - 4 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00798 Mepo-Chr7 12573311 12576657 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00798 1 232 MYB Transcription Factor Family AT1G17950 55.144 2.42e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo7g00798 Myb_DNA-bind_6 6.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00798 K09422 - gmx:100811746 351.673