LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo7g00796	ATGAATGCTTCAACGAAGAAGAAAATCCAGAAAAAGTGCAAAATCAGAGGCTACAACATCAAACCCGAAGCACTTGAAGAAATCCTCTCTTTCGTTACTCGCTTTGAACTCACCGAAGAAGAAGATGAAGCCACCGATATTGTTCTTGATCACCTCGAACAGGAATCTCTGAAATCTGCGATAATCGATGTGGAACCAGTGCAACGTGTGGTGAACTTGCTATTGGCAGCGGATGGGATGGAGGAAACTACTGATATGTTTGCATCCTCCTCTTCTTCAGCCATTGGTGTCATTGATGTGTTCGATATTCCTAGATATAAATACGACCCTATCAGAAGGAATTTCTACCAACACCCAGGAAGCTTACCTCGTCTTGGGGACCCACCAGCAAAATCTGATCTGTATAGAGATAGATTTTTGTTGTTGTCCCAAAGGCTTTCTCGCCATCAGGATTTTTCAAGGCCGGCTTTTGAGTCCGAACTTTCACAATTCCGGAGTTGTGAGATATCTCCTATTCAATCCCTGGTTGGGCGAAAAGGTAGAAGATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGACACTTTTATTTGGAAGACCTTAGCGCTTCTGTTGAAATCAACTTAACTGATGCTAAGATTACCACAGGATTCTTCTTAGAGAACACTATAGTTGTGGCCGAAGGCGAGATGCTTGCAGAGGGCATTTTTCAGATTTTTACATGTGGGTTTCCTCCATTAGAGGATCGAGATACATCACTTCAAGTACTTGCAGGACATGATTTTTTTGGTGGTGGTACTTTTACAAAAGAAGAAACGATCAGGCAAGCAGAGATGGAGAAAAGAGCAGTCAATGATATGTTTGTCATACTATCTGATATTTGGCTAGACAAAGAAGAGACTTTTGGAAAGCTAGAGATTGTTCTTGATGGTTTTGAGAATGTGGACGTGGTTCCTTCCTTATTTGTTTTCATGGGAGACTTCTGTTCTGAGAAATGTAGCCTTGCATTTAACGCTTATTCAAGCCTAAGGTCGCAATTTGGCAAACTAGGACAAATTATTGCTGCCCGTCCACGGTTAAAAGAGAACTGTCGATTTCTTTTTATTCCAGGTCCTGGCGATGCAGGCTCAACAGCTCTTCCAAGGTGTGCTCTGCCTAAATATTTAACTGAGGAGCTCCAAAATTATATTTCCGGTGCCATATTTTCAAGCAATCCTTGCAGGGTAAAATTCTATACCCAAGAAATTGTATTTTTCCGCCAGGATCAGCTGTATAACATGCGTCGATCGTGTTTACTGCCACCTTCCGAGACAGAAACTGTTGATCCTTTTCAGCATCTTGTTGCCACCATAACCCATCAAAGTCATCTCTGTCCACTCCCTCTAACTAAACAGCAACCCATCATATGGAATTATGATCATTCCCTTCATCTATATCCAACTCCGCACACGATAGTCTTGGGAGACAGAAGTCCGCAGAAGGCATTCAAGTACACAGGAATCACTTGTTTTAATACTGGATCCTTCTCAATGGATAGCACATTTGTAGTGTACCGTCCTTGCTCTCAGGAAGTTGAATTGTCATCCCTGTGA	1593	0.4231	MNASTKKKIQKKCKIRGYNIKPEALEEILSFVTRFELTEEEDEATDIVLDHLEQESLKSAIIDVEPVQRVVNLLLAADGMEETTDMFASSSSSAIGVIDVFDIPRYKYDPIRRNFYQHPGSLPRLGDPPAKSDLYRDRFLLLSQRLSRHQDFSRPAFESELSQFRSCEISPIQSLVGRKGRRWVMGVISQLEDGHFYLEDLSASVEINLTDAKITTGFFLENTIVVAEGEMLAEGIFQIFTCGFPPLEDRDTSLQVLAGHDFFGGGTFTKEETIRQAEMEKRAVNDMFVILSDIWLDKEETFGKLEIVLDGFENVDVVPSLFVFMGDFCSEKCSLAFNAYSSLRSQFGKLGQIIAARPRLKENCRFLFIPGPGDAGSTALPRCALPKYLTEELQNYISGAIFSSNPCRVKFYTQEIVFFRQDQLYNMRRSCLLPPSETETVDPFQHLVATITHQSHLCPLPLTKQQPIIWNYDHSLHLYPTPHTIVLGDRSPQKAFKYTGITCFNTGSFSMDSTFVVYRPCSQEVELSSL	530

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo7g00796	530	Pfam	DNA polymerase alpha/epsilon subunit B	288	493	IPR007185	GO:0003677\|GO:0006260
	Mepo7g00796	530	Gene3D	-	327	530	-	-
	Mepo7g00796	530	PIRSF	DNA_pol_epsilon_2	1	530	IPR016266	GO:0003677\|GO:0006261\|GO:0008622
	Mepo7g00796	530	Gene3D	-	2	73	-	-
	Mepo7g00796	530	PANTHER	DNA POLYMERASE EPSILON SUBUNIT B	1	530	IPR016266	GO:0003677\|GO:0006261\|GO:0008622

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo7g00796	16	499	Core DNA Replication Machinery Family	AT5G22110	63.918	0.0	639

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo7g00796	K02325		-	jre:109012089	782.326