Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00772 ATGGTTACCCCTGTTATTGCTATGGCTGACATTGTTGGAGTACCTTCTCTTCTACTTCAACCACCCTCAACAAATTCAATCACTTTCACTCTCAACACCAAAATCAAAACCCAAAAACATAAACTTTATCTCAATTTCTCACAAACCAACAACACAACAACCTCGTTTTCATCTTCCTTATCAACATCACTTAGAAACAATCATTGTTCTGTGTTGGCTTGTCTTCCTCCTGCTTCTGAATCCTCATCTTCTTCATCTTCTACTTCTCCTTCAACTAAGCTGTATGTTAGTGGGCTATCGTTTCGCACAACGGAAGAGAGCTTGCGAAATGCATTTAAGAATTTCGGTCAACTTGTGGATGTCAATCTGGTGATGGATAAAGTTGCGAATAGACCAAGAGGGTTTGCTTTTCTTCGTTATGCAACCGAAGAGGAATCGAAGAAAGCTATTGAAGGAATGCATGGAAAGTTCCTGGATGGTAGGGTCATATTTGTGGAAGTTGCTAAACCAAGATCAGAGCTAAGGCAGAGATCCAAGCAATAA 543 0.4015 MVTPVIAMADIVGVPSLLLQPPSTNSITFTLNTKIKTQKHKLYLNFSQTNNTTTSFSSSLSTSLRNNHCSVLACLPPASESSSSSSSTSPSTKLYVSGLSFRTTEESLRNAFKNFGQLVDVNLVMDKVANRPRGFAFLRYATEEESKKAIEGMHGKFLDGRVIFVEVAKPRSELRQRSKQ 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00772 180 Gene3D - 77 180 IPR012677 -
Mepo7g00772 180 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 92 170 IPR000504 GO:0003723
Mepo7g00772 180 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 94 163 IPR000504 GO:0003723
Mepo7g00772 180 SMART rrm1_1 93 166 IPR000504 GO:0003723
Mepo7g00772 180 SMART rrm2_1 93 166 IPR003954 GO:0003676
Mepo7g00772 180 PANTHER NUCLEOLAR PROTEIN 8 74 177 - -
Mepo7g00772 180 SUPERFAMILY RNA-binding domain, RBD 75 178 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00772 Mepo-Chr7 12216294 12219136 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00772 80 180 Eukaryotic Initiation Factors Gene Family AT4G34110 27.619 1.68e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00772 - K13195 gmx:100305561 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g00772 7 12216294 12219136 Mepo7g00772 7 12216294 12219136 ECH