Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00765 ATGGTTCAGAATTGCGGCTACGGTTGCAAGAAATCATTTTTGCCTAGTAGAGATCCAGAGTGGTACTTTTTCGGACCGCGGGACCGGAAATACCCTAATGGATTTAGAACAAATAGAGCAACAAGAGCAGGATACTGGAAATCTACTGGTAAAGACAGAAAAGTTTCATGCCAAAACAGACCTATTGGTATGAAGAAGACGTTGGTTTACTATAGAGGAAGAGCTCCTCAAGGAATTAGAACTGATTGGGTTATGCATGAGTATCGCCTTGATGATAAAGAGTGTGAGGATAACACTGGATTACAGGATACGTATGCATTGTGTCGAGTGTTCAAGAAAAATGGAATCTGTTCTGATATGGAAGAGCAACAAGGACAATGTAGCATGTTACAAATTGAATGTTCCCAAACCATAATCAATAATGAGTGTGAAATGATGTCTCCAGAAATACTAGGAGCATCATCTTCATGCTTAGAAGAAGAAGACAAAGATGATTCATGGATGCAATTCATCACAGAAGATGCATGGTATTCTTCTAATACACCAATGGTTGGTGGTGAAGAAATTTCACATGTTACATTTACAAATTAA 591 0.3841 MVQNCGYGCKKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRKVSCQNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDNTGLQDTYALCRVFKKNGICSDMEEQQGQCSMLQIECSQTIINNECEMMSPEILGASSSCLEEEDKDDSWMQFITEDAWYSSNTPMVGGEEISHVTFTN 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00765 196 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 147 - -
Mepo7g00765 196 Gene3D NAC domain 5 116 IPR036093 GO:0003677|GO:0006355
Mepo7g00765 196 Pfam No apical meristem (NAM) protein 17 90 IPR003441 GO:0003677|GO:0006355
Mepo7g00765 196 SUPERFAMILY NAC domain 16 114 IPR036093 GO:0003677|GO:0006355
Mepo7g00765 196 ProSiteProfiles NAC domain profile. 1 113 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00765 Mepo-Chr7 12182932 12186474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00765 9 185 NAC Transcription Factor Family AT3G17730 69.474 1.06e-88 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo7g00765 NAM 1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00765 - - gmx:100784495 355.91