LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo7g00753	ATGGCTGAGTTTGATAATGATGAGGTGCCAATTCTGTCAGATGCTAATCCAAAACAGTCAAATGAATCTGATGGTTCTAAATTCCAGAATCTTGTACCTAGGACGCAAAGTGTATCGATTTCTATTCCCATGATTCCTATGGAACCATATGAAAGGGATACTAATTTCAAGGGACACACAGGTCCTCTAAGGAGTCAAAGAAATGCTTCATTTAATCCGATGAGTGGTCCATTATATGTTACTCATACACCTGGAAATCTTTTCGGGCAGAATATGGTCGCACCGAGGAACAATGCTGGTAAAAATGAACATTTACTAAGGTCTGGTCAATTGGGAATGTGTAATGATCCTTACTGTACTACTTGTCCAACTTACTTCAAGGCTACTCAACAAAGCGATTTGAAAAGTTCGGGTCTGTTCAATCCTAAGCTTCAGAATGTTGTCTATGGGGATGCCAAGGATTGGGCAAGAAGATTTTTTGCTTTTTTGATTCCACATGTACCCAGAATTATGAATCCACATCATAAATTTGTACAACAATGGAATAAACTTTTTGCAATTTGTTGCTTGGTGGCAATTTTTGTGGATCCATTATTTTTCTTCTTGCTATCTGTGGATAAGGACCATAAATGTATTGTTCGTAACTCAACAATGACAACAGTGCTTGTTTTTCTCAGAAGTGTTAATGATTACATACATTTCCTAAATATTATTCTTCAGCAGTTTAGGTTGGCTTATGTGGTTTGTCCTGGAGAATTAGCTGACCATCCTAAGAAAATAGCTCTTCACTATCTTCAAACATATTTTCTTTTTGACTTGTTTGTTGTGCTTCCACTTCCTCAGATAATGATATTGATTTCCTTGGGGTCTTCAGTAGCACATTATACTAAGAATCTTCTACCTCTAGTGATCTTTGTCCAGTATATTCCAAAATTATTAAGATTTTTGACCCAGCTAATCGGCCAATCTCCAACTCAATTCATATTTGCGTCGGGCGAGGCAAATTTAACAATAGGTCTTCTCACCTTTATGTTCTCTGGCCATGTTGTTGGTTCTTGTTGGTACCTCTTTGGTCTACAGAGGGTTAACCAATGTTTGCGAGATGCCTGCCATCGTTCTAATCTACCTGGATGCATGGACTTGATTGATTTTCGTTCTAAAGAGAGTAATATATCAGCTAGGTGGATCAATGATGTGGGTGCCAATGCTTGTTTGAATTCCACATCTGGTGCTTTTTCTTATGGAATCTATGTCAATGCCATACCACTTACTATAGAAACCAATGTGTTCGACAAACATCTGTATGCACTCTTTTGGGGATTCCAGCAAATCATTACTTTGGCCGGTAATCAAACTCCAAGCTATTTTGTGTGGGAAGTCCTCTTTGCAATTTCCATCATGGCATTGGGACTCATACTTCTAGCCCTTCTCATCGGAAACATACAGGGCTTTTTTCAGTCTCTTGGCAAGAGGAGCCTAGAAAGGATAGGTAGACGTCATGATGCTGAGAAATGGATGAGCCATCGTCGATTACCAGAAGAGCTCAAAAGGAGAGTACGGCAGGCTGAACGGTATAGTTGGGCTGCAACAAGGGGTGTTTCTGAGAAAATGGTTTTGGAGAATTTGCCAGAAGATCTCCAGACACACATACGACGTCATATCTTCAAATTCGTTAAAAAAAAGGTGGTGTTTATCGTGCGTGGAAAATTGGAGAGCGTCGGAGAAGATGGAATTCCGGTTACGTTAACCGAAGGGGATGCTTGTGGTGAAGAGGTTCTAAGATGGTATCTTGAACGATCTTCTAAAAGCAAAGAAGGTAAAAAAGTAAAGCTTCAAGGATGGGGCTTAACTAGTACCAGATCAGTAAGATGCTTAAACAATGTGGAGGCATTTTCACTCCGCGTTAAAGACATTGAAGAACTCGCAACTCTTTTTGCAGGATTCTTGCGGAGCCCTCACAGTCAAGGAGTCATAAGGTATGAATCGCCTTGTGGGAAATCACAGAGAGCCAACAAAATTCAGATTGCATGGACAAACAAGAAGAAGCGTGTAAGACGAGCTAATACCGCACAATGA	2076	0.4003	MAEFDNDEVPILSDANPKQSNESDGSKFQNLVPRTQSVSISIPMIPMEPYERDTNFKGHTGPLRSQRNASFNPMSGPLYVTHTPGNLFGQNMVAPRNNAGKNEHLLRSGQLGMCNDPYCTTCPTYFKATQQSDLKSSGLFNPKLQNVVYGDAKDWARRFFAFLIPHVPRIMNPHHKFVQQWNKLFAICCLVAIFVDPLFFFLLSVDKDHKCIVRNSTMTTVLVFLRSVNDYIHFLNIILQQFRLAYVVCPGELADHPKKIALHYLQTYFLFDLFVVLPLPQIMILISLGSSVAHYTKNLLPLVIFVQYIPKLLRFLTQLIGQSPTQFIFASGEANLTIGLLTFMFSGHVVGSCWYLFGLQRVNQCLRDACHRSNLPGCMDLIDFRSKESNISARWINDVGANACLNSTSGAFSYGIYVNAIPLTIETNVFDKHLYALFWGFQQIITLAGNQTPSYFVWEVLFAISIMALGLILLALLIGNIQGFFQSLGKRSLERIGRRHDAEKWMSHRRLPEELKRRVRQAERYSWAATRGVSEKMVLENLPEDLQTHIRRHIFKFVKKKVVFIVRGKLESVGEDGIPVTLTEGDACGEEVLRWYLERSSKSKEGKKVKLQGWGLTSTRSVRCLNNVEAFSLRVKDIEELATLFAGFLRSPHSQGVIRYESPCGKSQRANKIQIAWTNKKKRVRRANTAQ	691

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo7g00753	691	MobiDBLite	consensus disorder prediction	13	33	-	-
	Mepo7g00753	691	MobiDBLite	consensus disorder prediction	1	33	-	-
	Mepo7g00753	691	Gene3D	Jelly Rolls	558	646	IPR014710	-
	Mepo7g00753	691	SUPERFAMILY	Voltage-gated potassium channels	173	486	-	-
	Mepo7g00753	691	Pfam	Ion transport protein	181	491	IPR005821	GO:0005216\|GO:0006811\|GO:0016020\|GO:0055085
	Mepo7g00753	691	Gene3D	Helix hairpin bin	497	555	-	-
	Mepo7g00753	691	SUPERFAMILY	cAMP-binding domain-like	492	644	IPR018490	-
	Mepo7g00753	691	PANTHER	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	560	685	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo7g00753	Mepo-Chr7	11940208	11955252	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo7g00753	5	601	Ion Channels	AT3G17700	49.183	0.0	593

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo7g00753	K05391		-	ccaj:109789004	810.831

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