LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo7g00751	ATGTCGACTGACCCGACAAATATCCCCACCTCACCATTGCCGTTAATTATAATTCCGGGGGATCGACCACCTGCAACCACTCCACCTTCCTGGACCCCACCAAACTCTAATGAAAGCTCTTCACCACAGTCAAGTATTTCAACCGGAGTTGTCGTTGCCATCGTGGTAGTTGTGATTCTTGTGGTGTTGTTCTTTCTCTGCATCTGCTGCTGCTGCCGTGCCCGCCGTGCGCGCCGTGCCCGCCGTGCCCGCCGTGCCTGCCCTGATGAAGAATGCGGTTCAAAGCCACTGTCTCCTGCTCCAATTCCATTAGGACAGACGTCTGATGCAGCACCGACAAAGAAGGCTAAGGCTCCGACAAAGAAGGCTAAGGCTCCACTTGAATCAGGACAGACGTCTGATGCAGCACCGACAGAGAAGGCTAAGGCTCCACTTGAATCAGGACAGCCGTCTGATGCAGCACCGACAAAGAAGGCTAAGGCTCCGACAAAGAAGGCTAAGGCTCCACTTGAATCAGGACAGACGTCTGATGCAGCACCGACAGAGAAGGCTAAGGCTCCACTTGAATCAGGACAGCCGTCTGATGCAGCACCGACAAAGAAGGCTAAGGCTCCGACAAAGAAGGCTAAGGCTCCACTTGAATCAGGACAGACGTCTGATGCAGCACCGACAGAGAAGGCTAAGGCTCCACTTGAATCAGGACAGCCGTCTGATGCAGCACCGACAAAGAAGGCTAAGGCTCCGACAAAGAAGGCTAAGGCTCCACTTGAATCAGGACAGACGTCTGATGCAGCACCGACAGAGAAGGCTAAGGCTCCACTTGAATCAGGACAGACGTCTGATGCAGCACCGACAAAGAAGGCTAAGGCTCCGACAAAGAAGGCTAAGGCTCCACTTGAATCAGGACAGACGTCTGATGCAGCACCGACAAAGAAGGCTAAGGCTCCACTTGAATCAGGACAGACGTCTCATGCAGCACTGCCACCTCCTTCTCTAGACAATGCATTAAGCTTTGGGAAGAACCTGATGACATACGAGGAGTTGGCAAATTCTACCAATAACTTTTCCAAGGATAACCTCCTCCGAGAAGGTAGATTTGGATCTGTGTACAAAGGTATTCTTCATAATGTTGAGATTGCTGTTAAGAAACTAAAAGATGGAAATGCACAAGGAGAACCCAAATTTCAAGCTGTAGTTGAGATTATTGAACGTGCTGGTCATAAACATCTTGTTTCCCTGGTTGGACACTGCAGCGCTGATTCTCAGAGGCTACTTGTTTATGAGTTTGTTCCTAACAAGACATTGGAATTCCATTTACATGAAAAAGGAGAACAAACATTGGATTGGTCAAAAAGAATGCAAATTGCTTTAGGATCTGGGAAAGGACTTGCATATCTTCATGAAAAGCGTCAGCCTATTATTCATTGTGATATTAAATCTGCAAACATTCTTCTAAATGATAATTTTGAAGCGAAGGTTGCTGATTTTGGTCTTGCAAAGATTTTTTCTGACCTCAACACTGAAGTGAATGGCTCTTTAGGGTATCTGGATCCCGAATATGTTAATAGTGGAAAACTTACAGACAAATTAGATGTTTTCTCTTATGGAGTCATGCTCATTGAGATAATGACTGGACGAAAACCGATTGGATTGCTTGACTGGGCTAGGCCTTTTCTCCTCCGTTTTGAAAAAGAAATTAATAAAGTAGATTCTCCTCTGGTTGATCCAAAGCTTTCACTTGACCTTAATGAGATGACTCAGATGACTCGTATGGTGGCATGTGCTGCAGCTTGCACGCTTAAGTCAGCAATAGATCGACCAACGATGAGCGAGGTAATGTGA	1842	0.4685	MSTDPTNIPTSPLPLIIIPGDRPPATTPPSWTPPNSNESSSPQSSISTGVVVAIVVVVILVVLFFLCICCCCRARRARRARRARRACPDEECGSKPLSPAPIPLGQTSDAAPTKKAKAPTKKAKAPLESGQTSDAAPTEKAKAPLESGQPSDAAPTKKAKAPTKKAKAPLESGQTSDAAPTEKAKAPLESGQPSDAAPTKKAKAPTKKAKAPLESGQTSDAAPTEKAKAPLESGQPSDAAPTKKAKAPTKKAKAPLESGQTSDAAPTEKAKAPLESGQTSDAAPTKKAKAPTKKAKAPLESGQTSDAAPTKKAKAPLESGQTSHAALPPPSLDNALSFGKNLMTYEELANSTNNFSKDNLLREGRFGSVYKGILHNVEIAVKKLKDGNAQGEPKFQAVVEIIERAGHKHLVSLVGHCSADSQRLLVYEFVPNKTLEFHLHEKGEQTLDWSKRMQIALGSGKGLAYLHEKRQPIIHCDIKSANILLNDNFEAKVADFGLAKIFSDLNTEVNGSLGYLDPEYVNSGKLTDKLDVFSYGVMLIEIMTGRKPIGLLDWARPFLLRFEKEINKVDSPLVDPKLSLDLNEMTQMTRMVACAAACTLKSAIDRPTMSEVM	613

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo7g00751	613	Gene3D	Phosphorylase Kinase; domain 1	331	429	-	-
	Mepo7g00751	613	ProSiteProfiles	Protein kinase domain profile.	355	613	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo7g00751	613	MobiDBLite	consensus disorder prediction	16	31	-	-
	Mepo7g00751	613	Gene3D	Transferase(Phosphotransferase) domain 1	430	613	-	-
	Mepo7g00751	613	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	473	485	IPR008271	GO:0004672\|GO:0006468
	Mepo7g00751	613	MobiDBLite	consensus disorder prediction	84	330	-	-
	Mepo7g00751	613	MobiDBLite	consensus disorder prediction	1	44	-	-
	Mepo7g00751	613	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	68	613	IPR047117	-
	Mepo7g00751	613	Pfam	Protein tyrosine and serine/threonine kinase	358	550	IPR001245	GO:0004672\|GO:0006468
	Mepo7g00751	613	Gene3D	-	45	101	IPR044912	-
	Mepo7g00751	613	FunFam	Os07g0541700 protein	430	513	-	-
	Mepo7g00751	613	SMART	serkin_6	355	608	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo7g00751	613	SUPERFAMILY	Protein kinase-like (PK-like)	334	613	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo7g00751	Mepo-Chr7	11878669	11886802	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo7g00751	339	613	Trihelix Transcription Factor Family	AT1G70460	54.296	3.32e-94	303

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Mepo7g00751		PK_Tyr_Ser-Thr	1.4e-38	CL0016