Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00735 ATGTCAGAAAATAAACGCTCTCATGAAGAGTCTCTCAAAGAGAATGAGGAGACCAAGAAAGAGATGAACAACTTGCAAGAGCAACCCAAATATGAAATTGGATCAGATCAAATGCATCCATCTAATAATGAAGAAGGAGATGAAGAAGAACAGGAAGATGAAGCTGAAGAAAAAGAGAAAGCTGGAAAAGTAGAATATGTGAGCAGAGATTTGTCAAACATACGTGAGATTGAGTGCCCTATTTGCTTTGGTATCATACGAAAAACAAAAACTATAAGAGAATGCTTGCATCGTTTCTGCGGAGAGTGCATAGAGAAGTGCATGCGCTCTGGTAAAAATGAATGTCCTATTTGCCGCACACATTGTCCTACTGAACTCTCACTGAGAGATGATCCAAATTATGATGCATTGATTGCTTTGTTGTATCCAGATATTGACAAGTTTGAGAAAGAGGAATTGGATTTGCTTAAAGAAGAGTTTCCCCAGCTACCTATAATGGAAAAACTAGAGGAAGTTGTTGATCGTGAAGAAGAAGAAGATTTTGTTGCTCAAATAATTGTGCACGCTGTAGTTCATTTTCATCATATGAATGATGAAAATGATTTTGCTGAAGAACCATTGGTTGATGATGATAATGAAGTCGCTGAAGAACTTGTGGTCGAAGAGGAAGACAGGGATGGTGATAGTAGCAACTCATCATAG 702 0.3789 MSENKRSHEESLKENEETKKEMNNLQEQPKYEIGSDQMHPSNNEEGDEEEQEDEAEEKEKAGKVEYVSRDLSNIREIECPICFGIIRKTKTIRECLHRFCGECIEKCMRSGKNECPICRTHCPTELSLRDDPNYDALIALLYPDIDKFEKEELDLLKEEFPQLPIMEKLEEVVDREEEEDFVAQIIVHAVVHFHHMNDENDFAEEPLVDDDNEVAEELVVEEEDRDGDSSNSS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00735 233 MobiDBLite consensus disorder prediction 1 26 - -
Mepo7g00735 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 142 IPR013083 -
Mepo7g00735 233 MobiDBLite consensus disorder prediction 1 63 - -
Mepo7g00735 233 SUPERFAMILY RING/U-box 70 133 - -
Mepo7g00735 233 ProSiteProfiles Zinc finger RING-type profile. 79 119 IPR001841 -
Mepo7g00735 233 Coils Coil 41 61 - -
Mepo7g00735 233 ProSitePatterns Zinc finger RING-type signature. 95 104 IPR017907 -
Mepo7g00735 233 PANTHER OS11G0578200 PROTEIN 5 178 IPR044592 -
Mepo7g00735 233 Pfam Zinc finger, C3HC4 type (RING finger) 78 118 - -
Mepo7g00735 233 Coils Coil 5 28 - -
Mepo7g00735 233 SMART ring_2 79 118 IPR001841 -
Mepo7g00735 233 CDD RING-HC_RING1-like 76 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00735 Mepo-Chr7 11704915 11712033 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00735 77 142 C3H Transcription Factor Family AT3G23060 37.143 2.93e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00735 K10695 - mtr:11436979 290.426