Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00719 ATGTCTTCCACCGGCGACAACCCCACCACCGTCCCCACCGCCACCCCCAATTCCGACGACCTCCGTCGTTACTTCTGCCACGAGTGCGAACGCACCTCCCTCATTTCCACCACCTCCACCGATCTCATCTGCCCCAATTGCAACTCCTCTTTCATCGAAGAACTCGAATCCCCAATTCCTAACCCTAACCCTAATCCTCTCCCTCCGTTCTTCTCTCACACCACCGAATTCCCTTCCGGAGGTTTCTCCTTTCCAATGCATTTCTCCGGTAACGGTGCTCCCACCGCCACAGCTACCGGAGCTGGTGCTGGTTCTCAACCGTTCAATGATCTCCCTGCTTTTTTTCAAACATCGCCGTCGATGTCACCGCCATCGCCTTCGCCTTTCGGTGAAGCTTTTAATCCGATGGCGTTTATTCAAAACTATCTCCGTAACATGAATGCTGGTGGAGGAGGAGGAATTCAGTTCGTCATCAACGACGGTGATGAGCCAGGTCGGTTTCGATTTCCTGGGTTTCCCGGTAACGCGAATCTAGGTGATTACTTCTTTGGTCCAGGGCTTGAGGATCTGATTCAGCAATTGGCGGAGAATGATCCGAATCGGAGGGGGACGCCGCCTGCGTCGAAGTCTGCTGTTGAAAAGCTGCCGGTGATTGAGGTGACGGAGGAGTTGCTGGAATCGGATTCATCTCAATGTGCTGTGTGTAAAGACACATTTGCCCTTGGTGAAAAGGCGAAGCAGATGCCGTGTAAGCATATATATCATGATGATTGTATCTTGCCGTGGTTGGAATTGCATAATTCTTGTCCTGTTTGTCGTTTTGAGTTGCCTACAGATGATCCTGATTATGAGCAGCGGGCTCGTGGTGGCGGTGGAAGTGGAGGAGGAGCTGGTAATGGTGGTGGTTCTGGTGGTGGTGGAGGTGGAGGTGGAGATGATTCAGTGAGGACAAGGTTTAGGGTTTCTTTGCCGTTGTTTCGGCATGTACCTTCGTCTTCTGGTGCTGCTGCAGGGACAAGTAATGTTGGGGGTGTGAATAACAATGATAGCAATAGTGGAAATGGTAGTGGACAACCCAATGCTGAGAATAGGGGTAATCAGAATTTTGAGTCAGAGACAAGACAAGAAGATCTTGATTGA 1140 0.5079 MSSTGDNPTTVPTATPNSDDLRRYFCHECERTSLISTTSTDLICPNCNSSFIEELESPIPNPNPNPLPPFFSHTTEFPSGGFSFPMHFSGNGAPTATATGAGAGSQPFNDLPAFFQTSPSMSPPSPSPFGEAFNPMAFIQNYLRNMNAGGGGGIQFVINDGDEPGRFRFPGFPGNANLGDYFFGPGLEDLIQQLAENDPNRRGTPPASKSAVEKLPVIEVTEELLESDSSQCAVCKDTFALGEKAKQMPCKHIYHDDCILPWLELHNSCPVCRFELPTDDPDYEQRARGGGGSGGGAGNGGGSGGGGGGGGDDSVRTRFRVSLPLFRHVPSSSGAAAGTSNVGGVNNNDSNSGNGSGQPNAENRGNQNFESETRQEDLD 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00719 379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 279 IPR013083 -
Mepo7g00719 379 MobiDBLite consensus disorder prediction 333 368 - -
Mepo7g00719 379 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 132 277 - -
Mepo7g00719 379 SMART ring_2 232 272 IPR001841 -
Mepo7g00719 379 CDD RING-H2_RNF126-like 231 273 - -
Mepo7g00719 379 Pfam zinc-ribbon 23 55 IPR039525 GO:0061630
Mepo7g00719 379 MobiDBLite consensus disorder prediction 283 379 - -
Mepo7g00719 379 ProSiteProfiles Zinc finger RING-type profile. 232 273 IPR001841 -
Mepo7g00719 379 Pfam Ring finger domain 231 273 IPR001841 -
Mepo7g00719 379 SUPERFAMILY RING/U-box 212 279 - -
Mepo7g00719 379 FunFam E3 ubiquitin-protein ligase RING1-like 193 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00719 Mepo-Chr7 11595176 11596579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00719 173 288 C3H Transcription Factor Family AT5G01980 50.862 2.41e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00719 K11982 - gmx:100818686 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g00719 7 11595176 11596579 Mepo7g00719 7 11595176 11596579 ECH