Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00711 ATGAACATGATTGATCGATGTTGGAGACCAAATCCTGAATGGAGAAAACATAGACAACAACTAGCGACTTGCTCTGTAGGCTATGCTGGAAAGATGACAAACAACATTGGTAAGGGTCTCATCCATTATAAAGTTACTGACCCAAATGATGATCCTATAAATCCTCAACCTGGTACGTTGAGATATGGAGCTTCTGTAATTCAAGGTAAAGTATGGATCACATTCAAAAAAGACATGAAAATTAAACTCATGAAGCCCCTTCTCATTAGCAGTTTCACAACCATTGATGGTCGTGGATTCAACGTGCACATTGGTGATAATGCATGCTTGATGATATCCAAGGCCACCAACATAATCATTCATAGCATTCGAATTCATCATTGCAAAGCTCAAGCCCCGGGGATGGTGATGGGGCCAAATGGAAAGGTAATTCATTTGGGCCAAGTAGATGGAGATGCAATTAGACTAGTCACCGCTTCAAAAATTTGGATTGATCATAACACGCTTTATGATTGCGAAGATGGACTTCTTGATGTCACACGGGGTTCTACTAATGTGACTATTTCCAATAATTGGTTTAGAGAACAAGATAAAGTTATGCTTCTTGGGCATGATGATGGATATGTGAGGGACATAAACATGAAAGTTACTGTTGTGTACAATCATTTTGGACCTAATTGCAACCAGCGAATGCCAAGGATTCGTCACGGATATGCACATGTAGCAAACAATCTTTACCTAGGATGGATGCAATATGCCATCGGCGGAAGCATGGGGCCTAGCCTCAAAAGTGAATCTAACCTCTTCATAGCACCTAAAGGTGGAAGTAAAGAGATAACATGGAGAAAAATTGGTCATACAAATGGCGACAAATGGGAATTTCATTCGGTAAGAGACGCTTTTGAAAATGGAGCCTCCTTCGAAGCTACAAAAGGAAGTCATGTGCCAAAGCCAAATTATAGCAAAGAACAAATTTTTCAAGTTGTTGATGTTAAATCTGTAAGATCTTTAACAAGATCATCAGGCGCATTTCAATGCAGTAAAACCTCCATATGTTGA 1059 0.3966 MNMIDRCWRPNPEWRKHRQQLATCSVGYAGKMTNNIGKGLIHYKVTDPNDDPINPQPGTLRYGASVIQGKVWITFKKDMKIKLMKPLLISSFTTIDGRGFNVHIGDNACLMISKATNIIIHSIRIHHCKAQAPGMVMGPNGKVIHLGQVDGDAIRLVTASKIWIDHNTLYDCEDGLLDVTRGSTNVTISNNWFREQDKVMLLGHDDGYVRDINMKVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYLGWMQYAIGGSMGPSLKSESNLFIAPKGGSKEITWRKIGHTNGDKWEFHSVRDAFENGASFEATKGSHVPKPNYSKEQIFQVVDVKSVRSLTRSSGAFQCSKTSIC 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00711 352 PANTHER PECTATE LYASE 18-RELATED 1 348 IPR045032 GO:0030570
Mepo7g00711 352 SUPERFAMILY Pectin lyase-like 1 319 IPR011050 -
Mepo7g00711 352 Pfam Pectate lyase 89 269 IPR002022 -
Mepo7g00711 352 Gene3D - 1 345 IPR012334 -
Mepo7g00711 352 SMART amb_all 78 275 IPR002022 -
Mepo7g00711 352 PRINTS Pollen allergen Amb family signature 252 271 IPR018082 -
Mepo7g00711 352 PRINTS Pollen allergen Amb family signature 323 346 IPR018082 -
Mepo7g00711 352 PRINTS Pollen allergen Amb family signature 86 102 IPR018082 -
Mepo7g00711 352 PRINTS Pollen allergen Amb family signature 150 171 IPR018082 -
Mepo7g00711 352 PRINTS Pollen allergen Amb family signature 292 316 IPR018082 -
Mepo7g00711 352 PRINTS Pollen allergen Amb family signature 230 249 IPR018082 -
Mepo7g00711 352 PRINTS Pollen allergen Amb family signature 49 74 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00711 Mepo-Chr7 11490533 11492095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00711 32 279 Polysaccharide Lyase AT5G09280 74.194 5.90e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00711 K01728 - gmx:100780437 627.861