Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00662 ATGGATCCAAAAGCATGTGATAAATCAGTGAAAGATTCTTCAGATTTCAAGTCTGAGAAGAAGATTCTTCACATAGTTGATAAATCAATTGCATGTCCCACTCCAGAGAAGAAGACTGAACCGTTATTAGCCACTAATTTCAAAGATTCAAATACCCAGCTTCCAGAAAAGTACAAGAATGTTGCTGATTTGTTTAGTGGTATGAGTTGTGCACTTAGATTGTTGCATCTGCGTAAAAAGTCTCCAACTTTTCTAAATATTTGCAACAAGGTTGAAGTTCTTGCTAAGAGAAACTTCTCTTATGCTCATCTAGCGCAGATGAAGTATATACTTCCCAAAGGTATAGAAATTGAAAAGGTGGTTGTTGTGGATAAGAAGAGCTTGTGTATGAAGCCGGATTTGAAGATAACCTTGGTATTTGACGTTGTAGAAGATCATTCCGAACAGTCTGCTGATTTGGCTCTTATACGATATTTTAATTCCAGGCTGATTAATTTCTTTAATCTGCATCCTGAGGGGACTGATATTCCAGAGGCCACACTACCAGAGCCCTTTAGCCAAAGACCTTATAACTTGATTTTCAAAGATGGAACTGTAAATTTGTCAAAAGAACTTTCATCAACTTCTAATGAAATTGAACTGTCACTGAACAACTTACATCTGAGTCCATCTTTTAAAAGACACTTTTCTCAGAAGAATGTTGCTAACGAGACTGAGCTAGTTCAGAGCTTTTCATCATCTGAAAACTCTATGTCATCCCATGAATCTGACTGGATGGATAACCAAGAAAGTGAAAGCACATGGCAGAAAGAATGTACACCATTGTCTGATTGTGTGAGTAATAATGTAGAAAGAGGCAAGCAGAAGGAATCACAGTCCATGTGTATTCAACAAAATGTTATTAATACACCAGTACATAAGATCTCCCCTCCACATTCTGTTAGCTGCATTGAAAGCCCTGATTTGAAAATTGTTTCTTGTACGGATAGTTTGTCGACACACACTCCTGCACAGTCGGCACCTGAGAGATTGTTGCTCGGTTCTGATGTTAAGCTTCAGAAAATGATTGCCCAAAAGTCTGGGTCGTGTTTTAAGCCTGCAAAAAGAGTGCTCGACTTTACACTCACTGAAGGCAGTGATGATTTTGACAATAGAGTATACATGTCTAAACCTAGCAGAGGATGTTCTGAGGACTTCAAATCTTTTGATTCTATTTCCCCGCCTCAGGAGGTAGATGAGAACGTTGGTCATTGTTTTCAGAAAATCAACGTAGATCAACATTGTTTGGTTGCATCGGATAACAATCCTTCATCATTGGTGGAACTGGTTAATTTGATTGATTCTATATTTGACTCTGTCAAAAGAACTTCAATCACAAAAGAGGAGCTCTTGCAAAAGATAATGATGAACTGTTTAGATTTTGTTGAGATTAGAGAAGCTGAAGAACAGATTGAGATTTTGGAAAAGACTGTGCCAGACTGGCTTTGCAAGAAGGTGGTTTCTTCTGGAGACACTATGTACTGTGTCAAGAATGCGTTAGATTTGGACTCAGTTCGATCGAGGCTTCTCAGCAATGTCAACAAAGGAGATGAGTGA 1596 0.3841 MDPKACDKSVKDSSDFKSEKKILHIVDKSIACPTPEKKTEPLLATNFKDSNTQLPEKYKNVADLFSGMSCALRLLHLRKKSPTFLNICNKVEVLAKRNFSYAHLAQMKYILPKGIEIEKVVVVDKKSLCMKPDLKITLVFDVVEDHSEQSADLALIRYFNSRLINFFNLHPEGTDIPEATLPEPFSQRPYNLIFKDGTVNLSKELSSTSNEIELSLNNLHLSPSFKRHFSQKNVANETELVQSFSSSENSMSSHESDWMDNQESESTWQKECTPLSDCVSNNVERGKQKESQSMCIQQNVINTPVHKISPPHSVSCIESPDLKIVSCTDSLSTHTPAQSAPERLLLGSDVKLQKMIAQKSGSCFKPAKRVLDFTLTEGSDDFDNRVYMSKPSRGCSEDFKSFDSISPPQEVDENVGHCFQKINVDQHCLVASDNNPSSLVELVNLIDSIFDSVKRTSITKEELLQKIMMNCLDFVEIREAEEQIEILEKTVPDWLCKKVVSSGDTMYCVKNALDLDSVRSRLLSNVNKGDE 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00662 531 Coils Coil 477 497 - -
Mepo7g00662 531 SUPERFAMILY "Winged helix" DNA-binding domain 51 185 IPR036390 -
Mepo7g00662 531 Pfam DNA replication factor Cdt1 C-terminal domain 438 495 IPR032054 -
Mepo7g00662 531 Pfam DNA replication factor CDT1 like 54 118 IPR014939 -
Mepo7g00662 531 CDD Cdt1_m 35 184 IPR014939 -
Mepo7g00662 531 Gene3D - 433 529 IPR038090 -
Mepo7g00662 531 PANTHER DNA REPLICATION FACTOR CDT1 41 523 IPR045173 GO:0003677|GO:0030174|GO:0071163
Mepo7g00662 531 SMART CDT1_2 54 183 IPR014939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00662 Mepo-Chr7 10971842 10976349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00662 439 522 Core DNA Replication Machinery Family AT3G54710 44.048 7.97e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00662 K10727 - gmx:102670055 538.495