Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g00615 ATGAATAAAATTGGACCTATTAAAGCAAGTGAATTATCAATTCTTTGCGGTGCTAGAGTTGGTATGGTTGGATTCACCGTTGCCGGTAACCTATTTGATTTTGGCTCTTCAGCTTTTAAGTTCCGACTGAGGAGTACCTTCATGAAGGACAATGTGAATCATCAAGGCAAAATGTTAAGCCTTCTCAAAATCAAAACATCAACATGCTCAACAAATAACGATTGA 225 0.3733 MNKIGPIKASELSILCGARVGMVGFTVAGNLFDFGSSAFKFRLRSTFMKDNVNHQGKMLSLLKIKTSTCSTNND 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g00615 74 Gene3D - 7 69 IPR036879 GO:0003677|GO:0046983
Mepo7g00615 74 ProSiteProfiles MADS-box domain profile. 8 38 IPR002100 GO:0003677|GO:0046983
Mepo7g00615 74 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 8 34 IPR002100 GO:0003677|GO:0046983
Mepo7g00615 74 SUPERFAMILY SRF-like 8 46 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g00615 Mepo-Chr7 10235148 10235540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g00615 8 40 MADS-box Gene Family AT4G37940 54.545 1.67e-07 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mepo7g00615 SRF-TF 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g00615 - K09264 cam:101509856 50.447